Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1467 ATGGAAATGAAGAAGCTCTTGTTGTTTTCCTTATCCCTTGCTTTAATTTTCAGAGCAACCAACACCTTTGATTTCAACGAACATGATTTAGACTCAGAGAAAAGTTTATGGGATTTGTACGAAAGATGGAGAAGTCACCACACAGTTACTCGAAGCCTCGATGAGAAGCATAATCGCTTCAACGTGTTCAAAGCCAATGTTATGCATGTTCACAATACAAATAAATTGGATAAACCTTATAAGCTTAAGTTGAACAAGTTTGCAGACATGACAAACTATGAATTTAGAAGGATCTATGCTGATTCTAAGGTTAGTCACCATAGAATGTTTCGTGGTATGTCAAACGAGAATGGAACATTCATGTACGAGAATGTGAAAAATGTTCCTTCTTCAATTGATTGGAGAAAGAAAGGCGCTGTCACGGACGTAAAAGATCAAGGCCAATGCGATGGAACTTGTGATCTAAAAAAGGAGGATAAGGCAGAAGTGTCAATTGATGGGTATGAAAATGTGCCAATAAATAATGAAGCTGCATTGCTGAAAGCTGCTGCCAAACAACCTGTCTCTGTAGCTATTGATGCTGGGGGATATAATTTCCAGTTCTATTCTGAGGTAAATTTCAAGTCTAATCAAGTAAAAAAATTAAATGCCAAAAATTTATCTTTTAAAAACGAACAATAG 681 0.3627 MEMKKLLLFSLSLALIFRATNTFDFNEHDLDSEKSLWDLYERWRSHHTVTRSLDEKHNRFNVFKANVMHVHNTNKLDKPYKLKLNKFADMTNYEFRRIYADSKVSHHRMFRGMSNENGTFMYENVKNVPSSIDWRKKGAVTDVKDQGQCDGTCDLKKEDKAEVSIDGYENVPINNEAALLKAAAKQPVSVAIDAGGYNFQFYSEVNFKSNQVKKLNAKNLSFKNEQ* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1467 226 Pfam Cathepsin propeptide inhibitor domain (I29) 40 95 IPR013201 -
Psa4g1467 226 Gene3D Cysteine proteinases 12 150 - -
Psa4g1467 226 PANTHER KDEL-TAILED CYSTEINE ENDOPEPTIDASE CEP1 20 150 - -
Psa4g1467 226 PANTHER KDEL-TAILED CYSTEINE ENDOPEPTIDASE CEP1 150 212 - -
Psa4g1467 226 Pfam Papain family cysteine protease 128 150 IPR000668 GO:0006508|GO:0008234
Psa4g1467 226 Pfam Papain family cysteine protease 151 214 IPR000668 GO:0006508|GO:0008234
Psa4g1467 226 Gene3D Cysteine proteinases 151 219 - -
Psa4g1467 226 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 20 150 - -
Psa4g1467 226 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 150 212 - -
Psa4g1467 226 SMART Inhibitor_I29_2 40 95 IPR013201 -
Psa4g1467 226 SUPERFAMILY Cysteine proteinases 36 209 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1467 Psa-Chr4 103147197 103148421 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1467 K16292 - gmx:100806581 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1467 4 103147197 103148421 Psa4g1467 4 103147197 103148421 ECH