Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1442 ATGGCTGCAACTGCTACTTCCTCTCTGTTTTCAATCGCAATAAACCCAAACCATGTTCTTAAGCCAAAGCGTTTCATCCTTCAACCTAACCTTCCTTTTTTCAAATCTCTCAAATGCATCCCTTCCAACACCTCTCTTTCCTGCTCCGCCGTCGCTTTTCCCGAAACCGCCGAGCTCGTCGTTCCTTCCAAGCTACGCCATCTAGCCGATGAGTTTCAGTCGTTACCTGAACCAATGGAGCGGATGAAGCGGCTGTTACATTACGCGGGACTCATAACACCTATGGATGAGTCGGTTCGCGTTGACACGAACCGGGTTATGGGTTGTACTGCGAGGGTTTGGGTTGAGGTGAAGATCGACGGCGAAGGGAAGGTGAGATTAACGGCTGACAGTGACTCGGAGATCACGAAAGGTTTCTGCGCGTGTTTGGTTTGGGTTCTTGACGGGTCTGAACCGGAGGCCGTTTTGAAAGTTTCCACGGACGATTTGGTGGCTCTCAATGTTGGTTTACCGGGAACCGGTCGTTCTAGGGTGAACACGTGGCATAACGTTCTTGTTACTATGCAGAAAAAGACGAAACAGTTGGTTGCTGAGAGAGATGGGAAAGTTCCGTTTGAGCCTTTTCCTTCGTTGATTATTACTGCTGATGGCTTTGTTCCTAAGGGTAGTTATGCTGAAGCCCAGGCAAAATACCTGTTCCCTAACAAGTTAAAAGTTGATGAACTAGTCAATGTGCTGAAGGATAAGAAAATAGGTGTAGTTGCGCACTTTTACATGGATCCTGAAGTCCAAGGCATTTTAACTGCTGCTCAGAAGCAGTGGCCTCATATCCATATATCTGATTCACTGGTCATGGCAGATTCAGCAGTCAAAATGGCAAAAGCTGGATGCAAATTCATAACAGTGCTAGGTGTGGACTTTATGTCGGAAAATGTGCGCGCCATCCTTGATCAAGCCGGTTTCAATGAGGTCGATGTTTATAGAATGTCAAATGAGCGTATTGGTTGCTCACTGGCTGATGCTGCAGCTACCTCTACTTATATGGAGTATCTGGAGCCAGCTTCTAGGTCTACTTCCTTGCATGTCATATACATTAACACTAAGTTAGAGACAAAGGCATATGCTCATGAGCTTGTGCCAACAATAACCTGTACCTCATCAAATGTTATCCAGACTATTCTACAGGCATTTGCCCAAGTGCCAGATTTGAGCATATATTATGGGCCTGATTCTTACATGGGTGCAAATATTGTAGAATTGTTCCAACAGATGACAGTAATGACCGATGAAGAGATTGCTGCGATACATCCTGAGCACAATGTAGACTCTATTAAATCCTTACTACCACGACTTTACTTTTATCAGGATGGATCATGCATTGTTCATCATCTATTTGGCCATGAAGTTGTGGATACGATAAAAGAAATGTATTGTGATGCATTCCTTACTGCCCATCTTGAGGTACCTGGAGAGATGTTTTCATTGGCAATGGAAGCAAAAAGAAGAGGAATGGGAGTAGTAGGGTCCACCCAGAATATAATTGGATTCAATAAAAGAACAGGGTTCAAGAGATCTTTGGATAGAAACATTGATGACCATCTTCAATTTGTTTTAGGAACAGAATCTGGGATGGTGACTGCAATTGTGGCAGCAGTTCGTAGTCTGTTAGAGCCTGCAAAATCCTCTTCTCATGGAGCAAAAGTTACTGTTGAAATTGTGTTTCCAGTTTCATCAGACTCAATCTCGAAAACAACTTCTAGTCTAAATTCAGTTGAAGTCAGTGATATCATACCTCCTGTTGTACCAGGAGTAACTAGCGGGGAGGGTTGTTCCATTCACGGTGGTTGCGCATCTTGTCCTTACATGAAGATGAATTCTCTTAGCTCACTCCTGACAGTTTGCCATCACCTACCCGACGAAGAAAATATGTTATCTGCATACAAAGCAGAGCGATTCAAGTTGCAGACTCCAAATGGTCAATCAGTGGCCGACGTAGGATGTGAACCAATTTTGCATATGAGGAACTTTCAGGCTACTAAAAAGCTTCCAGAGAAACTGGTTAATCAGATTCTTCACACCAAAGACAGTGGAAGGTTGGTGTGA 2103 0.4394 MAATATSSLFSIAINPNHVLKPKRFILQPNLPFFKSLKCIPSNTSLSCSAVAFPETAELVVPSKLRHLADEFQSLPEPMERMKRLLHYAGLITPMDESVRVDTNRVMGCTARVWVEVKIDGEGKVRLTADSDSEITKGFCACLVWVLDGSEPEAVLKVSTDDLVALNVGLPGTGRSRVNTWHNVLVTMQKKTKQLVAERDGKVPFEPFPSLIITADGFVPKGSYAEAQAKYLFPNKLKVDELVNVLKDKKIGVVAHFYMDPEVQGILTAAQKQWPHIHISDSLVMADSAVKMAKAGCKFITVLGVDFMSENVRAILDQAGFNEVDVYRMSNERIGCSLADAAATSTYMEYLEPASRSTSLHVIYINTKLETKAYAHELVPTITCTSSNVIQTILQAFAQVPDLSIYYGPDSYMGANIVELFQQMTVMTDEEIAAIHPEHNVDSIKSLLPRLYFYQDGSCIVHHLFGHEVVDTIKEMYCDAFLTAHLEVPGEMFSLAMEAKRRGMGVVGSTQNIIGFNKRTGFKRSLDRNIDDHLQFVLGTESGMVTAIVAAVRSLLEPAKSSSHGAKVTVEIVFPVSSDSISKTTSSLNSVEVSDIIPPVVPGVTSGEGCSIHGGCASCPYMKMNSLSSLLTVCHHLPDEENMLSAYKAERFKLQTPNGQSVADVGCEPILHMRNFQATKKLPEKLVNQILHTKDSGRLV* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1442 700 Pfam Fe-S metabolism associated domain 70 190 IPR003808 -
Psa4g1442 700 SUPERFAMILY SufE/NifU 62 199 - -
Psa4g1442 700 Gene3D - 60 197 - -
Psa4g1442 700 Pfam Quinolinate synthetase A protein 244 550 IPR003473 GO:0008987|GO:0009435|GO:0051539
Psa4g1442 700 SUPERFAMILY NadA-like 239 640 IPR036094 GO:0008987|GO:0009435|GO:0051539
Psa4g1442 700 PANTHER QUINOLINATE SYNTHETASE A 207 690 IPR003473 GO:0008987|GO:0009435|GO:0051539
Psa4g1442 700 Gene3D - 346 449 IPR036094 GO:0008987|GO:0009435|GO:0051539
Psa4g1442 700 Gene3D - 459 555 IPR036094 GO:0008987|GO:0009435|GO:0051539
Psa4g1442 700 Gene3D - 234 345 IPR036094 GO:0008987|GO:0009435|GO:0051539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1442 Psa-Chr4 101171303 101184176 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1442 K03517 - qsu:112033542 1004.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1442 4 101171303 101184176 Psa4g1442 4 101171303 101184176 ECH