Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1375 ATGATTCGCCGAATGACAAACCTTCCACGAAGCATAATGAGCTTCGTGGGATTAGGAAGAAGAAGAAGAAATCAAAACGCAAATTTTCCAATGCAAACTCTAGACTCTCCAGAACCACAAGATATTTTAGCAACTTCAGAAGAGTGGACTTTTCTAAACAACTTTGAGCAACAATATGGCACCAAACATCCCTTCTTTTATGCTTGTTGTTTTGTTGAAGCTATGAAGTTAGCAGAACAAGATCAAAAGTTTGTGTTCATGTATCTTCATTCACCGGATCACCCTTTTGCAAACGTTTTCTGCAAGGAAACCCTGTGTTCGGAGCTAGTGATTCAGTTTCTTGATGTGAATTTTGTTTGTTGGGGTGCAGTTGCAGATAGAGGAGAGGGTTTGCAAATGGCTTCAACATTGAGACCTTCTAGCTTTCCTTGTTGTGCTGTCATAAGCCCTAATCCTAGTGATAGCATAATGGTGCTGCAACAGCTAGAGGGACCACTCTCACCAGCAGAGCTAGTGGAGATTCTACAAACAACATTGGAAGAACAAGGGTTGGCTTTTGGTGGTGCTAAAGCTAAGCGAAATGAAAAGATTCGTGCAGATCGTAGGCTCAGAGAAGAACAAGATGCTGCATATCTTAAGGCTTTGCAAATTGACAAGGAAAAAGAAAAGCTCAGAAGCTTACCCTCAAAAGAGAGAGTTCAGAAGTCAGTGGAAACTCAGAAGTTAAACATCAATCCTATAAATGTCAGTAAATTTCATTATCAAAACAAAACAGGAAATGAACCAACTGGTGAGAAAAAAGACAAGGGAATTGCAGGTAGAGGGAAAGAGACTCAAGTTGCACAGATACTCATAAGGTTTCCAAATGGGGAAAGAAGAGAACATACTTTCCTATGCAGTGACAAAATTCAGTCCATTTTTTCATATATTGATTCATTAGGTCTGGCTGGACTTGGGAACTATAGACTGGTATCAAATTTTCCTAAAAGAGTTTATGGTGTTGATCAAATGAGAATGTCTCTCAAAGATGCTGGTTTGTATCCTAAAGCTAGTTTGTTTTTGGAGCCTTTGTGA 1074 0.3939 MIRRMTNLPRSIMSFVGLGRRRRNQNANFPMQTLDSPEPQDILATSEEWTFLNNFEQQYGTKHPFFYACCFVEAMKLAEQDQKFVFMYLHSPDHPFANVFCKETLCSELVIQFLDVNFVCWGAVADRGEGLQMASTLRPSSFPCCAVISPNPSDSIMVLQQLEGPLSPAELVEILQTTLEEQGLAFGGAKAKRNEKIRADRRLREEQDAAYLKALQIDKEKEKLRSLPSKERVQKSVETQKLNINPINVSKFHYQNKTGNEPTGEKKDKGIAGRGKETQVAQILIRFPNGERREHTFLCSDKIQSIFSYIDSLGLAGLGNYRLVSNFPKRVYGVDQMRMSLKDAGLYPKASLFLEPL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1375 357 Gene3D Glutaredoxin 44 184 - -
Psa4g1375 357 CDD UBX 283 355 - -
Psa4g1375 357 SMART ubx_3 274 356 IPR001012 GO:0005515
Psa4g1375 357 PANTHER UBIQUITIN-ASSOCIATED (UBA) PROTEIN-RELATED 1 356 - -
Psa4g1375 357 SMART 45neu3 50 176 IPR006577 -
Psa4g1375 357 SUPERFAMILY Thioredoxin-like 46 184 IPR036249 -
Psa4g1375 357 SUPERFAMILY Ubiquitin-like 227 356 IPR029071 -
Psa4g1375 357 Gene3D - 275 356 - -
Psa4g1375 357 Pfam UBX domain 277 355 IPR001012 GO:0005515
Psa4g1375 357 ProSiteProfiles UBX domain profile. 276 354 IPR001012 GO:0005515
Psa4g1375 357 Coils Coil 189 209 - -
Psa4g1375 357 CDD UAS 71 181 - -
Psa4g1375 357 PANTHER FAS-ASSOCIATED PROTEIN 1 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1375 Psa-Chr4 95400966 95403974 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1375 K18726 - gmx:100775212 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1375 4 95400966 95403974 Psa4g1375 4 95400966 95403974 ECH