Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1349 ATGGCAACGACGCAATCACCACCTCCTCCTCCCGTTGCCACCGTCACCGCCACCGATGTAAACCAAGGTACTGAATCTATCCAACCAACAAACATGGATCAGCAAACTGCTGTAGATGAGTCTGTTAAACCCAGTTCAACTACATCAGTCTTTGTGAACTCAGAACCATTGCGGGAAGAACAAGTTCAGAATGCTGTGAAATTTCTGTCACACCCAAAAGTTAAAGGTTCGCCCGTCATGTACCGGCGGTCATTTTTGGAGAAGAAGGGCCTTACAAAAGAGGAGATTGATGAAGCCTTTCGGCGTGTGCCTGATGCGGCTCCGACTGTGCAGACAGATGGTGGAAATCAAGATGGGCGATTGAAATCATCATCAAATATTCAGCAACAGGCCCAACAGCAAACTTTGCAGCCTGTTTTACCTGCTTCTGCTGGTGTTAATACTTCATCAGGAACCTTAGCACGAACCAAATATCACTGGTCCCATGCCCTTATTTTAGTTGGAGTTCTGACTGCTTCAGGTGCTGGAACAGTTTTGATAATTAAGAATTCCCTTCTTCCTCGGTTAAAATCTTGGATACGCAAGGTTGTCTTAGACAAAGATGATGAACTATCAAGGGAAACCAACAACAAACCAACTCTGGCTGAAGAAGTTGCTCAAGCTGCAAAATCAGCAGCAGCTGCAGCTGCAGATGTGGCAAAAGCAAGCCAAGATATGCTGGCTTCAAAGGGTGAAGAAAGGAAATACTTTGTGGAAGTTGTGAGTCTTTTAGATAAGCAAATACAAGAAATGAAGTTAATGACAAATGCAATAAGAAGATTGGAAGGGCAAGAAGATCTCCGAGTCAGTCAAACAAGTTCGAAGCGACTGGTTGCGAATGGCAAGGCGGACTATGACTTGCGTCCAGGGAGATCATTATCCCCACCCGCATCTGTTGAACCATCAGGTCCTCCTCATCCAAAATCATATATGGAGATAATGGCCATGGTCCAAAGAGGGGAGAAGCCTTCTAACATCAGAGAGATCAATGATTTACCCCCCAACCCAAGTCAACAGCCGTCAGATCCTCGCATATTGCCTAGATCTAAGCCTTGGGAGATTGGTCAGGTTCAAAACACCTCTAGCAAAGTGTTTCAGCCTCAAGCAAATGGTGAGGAATTGTATACCAAAGTCCAAGATACTACTCAATCAAATGGGGATGACCCATCCCCCTGGTGGCAGAAGAAAAACGTCAGAATCCGGGAGATTGATGAAAATGTGTCTAATGGAGCACCTATTGGCACCACGCCCAGTCAGCAGCCTCTACAACGTGTGTGGGTTCCTCCTCAACCTCCACCAATAGCTATGGCAGAGGCCGCAGAAGCAATCAGACGCCCAAAACAAGCTGTTCAAAAAGAACCGGTGTCAGATAATCAGTCAGTAGCTCAATCTTCAGATACCTCTAACTCTAATGGGGTGCATGAGATCCCAAAACCATTGGAAACTGATGGTGCTGTAGAGGGAAGCAATGTCAGCTCTGGTGATATACAAGTTGTACAAGAAGACCATGAAACCAAATACGAAGAGCAATGA 1572 0.4567 MATTQSPPPPPVATVTATDVNQGTESIQPTNMDQQTAVDESVKPSSTTSVFVNSEPLREEQVQNAVKFLSHPKVKGSPVMYRRSFLEKKGLTKEEIDEAFRRVPDAAPTVQTDGGNQDGRLKSSSNIQQQAQQQTLQPVLPASAGVNTSSGTLARTKYHWSHALILVGVLTASGAGTVLIIKNSLLPRLKSWIRKVVLDKDDELSRETNNKPTLAEEVAQAAKSAAAAAADVAKASQDMLASKGEERKYFVEVVSLLDKQIQEMKLMTNAIRRLEGQEDLRVSQTSSKRLVANGKADYDLRPGRSLSPPASVEPSGPPHPKSYMEIMAMVQRGEKPSNIREINDLPPNPSQQPSDPRILPRSKPWEIGQVQNTSSKVFQPQANGEELYTKVQDTTQSNGDDPSPWWQKKNVRIREIDENVSNGAPIGTTPSQQPLQRVWVPPQPPPIAMAEAAEAIRRPKQAVQKEPVSDNQSVAQSSDTSNSNGVHEIPKPLETDGAVEGSNVSSGDIQVVQEDHETKYEEQ* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1349 523 MobiDBLite consensus disorder prediction 465 488 - -
Psa4g1349 523 Pfam Pex14 N-terminal domain 58 102 IPR006785 -
Psa4g1349 523 MobiDBLite consensus disorder prediction 418 523 - -
Psa4g1349 523 MobiDBLite consensus disorder prediction 279 318 - -
Psa4g1349 523 MobiDBLite consensus disorder prediction 422 436 - -
Psa4g1349 523 Gene3D - 50 111 IPR036388 -
Psa4g1349 523 MobiDBLite consensus disorder prediction 15 54 - -
Psa4g1349 523 MobiDBLite consensus disorder prediction 104 131 - -
Psa4g1349 523 Pfam Family of unknown function (DUF5572) 318 366 - -
Psa4g1349 523 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 17 507 - -
Psa4g1349 523 MobiDBLite consensus disorder prediction 110 131 - -
Psa4g1349 523 Coils Coil 257 277 - -
Psa4g1349 523 MobiDBLite consensus disorder prediction 1 54 - -
Psa4g1349 523 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 17 507 IPR025655 GO:0005515|GO:0005778|GO:0016560
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1349 Psa-Chr4 94380261 94389997 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1349 K13343 - gmx:100784152 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1349 4 94380261 94389997 Psa4g1349 4 94380261 94389997 ECH