Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1276 ATGGCGTGTCGATTGGTTACTTGTTTTGGTGGGCGACTTCTAGGGAAATTTTCACATTTAATGTTGTGCATGGTGCTTGAATGGGTGTTGTTGATTTCACTCTTCATTGATGGGTTTCTAGCATTTTTCACCACTGAGCTTTCAAGGTTCTTTGATTTGGAAATTCCGTGCTGGCTCTGCGCGAAGATGAATCATGTTCTGGCGCACAATACGCCTAATTTTTATTACAACAATTCCATATGTGTGGCTCACAAGAAAGACCTTTCATCTATGGCGTTTTGTCACAACCACAAGAAGCTTTCTGATATAAGACAGATGTGTGAAGGGTGTTTACTTTCATTCGCAACGCAGAAGGAATCAGATTGTGATACCTATAAGTCTCTTGTAGGGGTTTTGAATAAGAATCTCGAGTGCTTTGTTGAGGATGGACAAAACATTCTATTGAGTCTGAAGGACGGCAAGGTCTTGCAGGCCGAGAAAAGTACTCAGATGTGTGCATGCTGTGGAGCACCATTGAAACTCAAATCTTCCATCTCAAGTAAGAATTCAGACTCGATTTCACAATCTCCAGCCGCTTTGCCACCAGCTTATCCAACCGCGACGCCAAAGTCTGAGGAATCTTGCGGTGTAGATTCGCCTCAAATCCTGTCTGCAAAAAAAGATTCAAAGCTTCCACAGAATGAGGATGACAGCAACCTTAAAAATCAGAACAATAAATTCAAGGAAGTACCAAAAGAAGCCACGATGCCTCTATTGACAGGATCCAATGATTTAAGCTTAGAGTCCCCGAAAACCCCGTCTTTACCATGGAGCAGCAGGTTTTTCGGAGTTCCATTTATAGATTCTCCAAACAACAGTCCAAGATGGTCTTCTGTGCCGACCAAGAAATCACTGCTAGAAAAGACAGAATATGCCTCTGACTCTAGCGAGGTTAGTTCTCAAAATGAAGAAGACGATCCCGTCTTAAACAATTTGAAGAGGCAAGTTCGTCTGGATCGCAAGTCACTCATGGCGTTGTACATGGAGCTGGATGAAGAGAGAAGTGCTTCAGCTGTTGCGGCCAACAATGCTATGGCTATGATCACCCGCTTACATGAAGAGAAGGCAGCTTTGCAGATGGATTCTTCACAGTATCAAAGAATGATGGAGGAGCAGATAGAGCATGATGAAGAAGTCCTGCAAGAAACTAATGAGCTTCTTCTCAAACTAGAGGAAGAAGTTAAGACATTAGATACCGAGTTAGAGATTTACAGAGCTACATATGGATACTTGACAGAAGATGATGTTAAGGCTCATGGTGGCAACAGCTTTTCAACCGAGTCTATTGAATGCGAGGATGATGTAGAACAATACCTCGATCTTCAACAACCTGGTTCGTCAAAGGCATATAATGGGGAGGGGAAAATCAAGGAGTCACTAAAAGATTTTAGAACGGAGAGAACATATATTCTTGGCAAGAAGAAAATGGAAACTGCAACTCTCTTGACAGAGAGTGGAATATAA 1503 0.4232 MACRLVTCFGGRLLGKFSHLMLCMVLEWVLLISLFIDGFLAFFTTELSRFFDLEIPCWLCAKMNHVLAHNTPNFYYNNSICVAHKKDLSSMAFCHNHKKLSDIRQMCEGCLLSFATQKESDCDTYKSLVGVLNKNLECFVEDGQNILLSLKDGKVLQAEKSTQMCACCGAPLKLKSSISSKNSDSISQSPAALPPAYPTATPKSEESCGVDSPQILSAKKDSKLPQNEDDSNLKNQNNKFKEVPKEATMPLLTGSNDLSLESPKTPSLPWSSRFFGVPFIDSPNNSPRWSSVPTKKSLLEKTEYASDSSEVSSQNEEDDPVLNNLKRQVRLDRKSLMALYMELDEERSASAVAANNAMAMITRLHEEKAALQMDSSQYQRMMEEQIEHDEEVLQETNELLLKLEEEVKTLDTELEIYRATYGYLTEDDVKAHGGNSFSTESIECEDDVEQYLDLQQPGSSKAYNGEGKIKESLKDFRTERTYILGKKKMETATLLTESGI* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1276 500 MobiDBLite consensus disorder prediction 300 319 - -
Psa4g1276 500 ProSiteProfiles GTD-binding domain profile. 320 418 IPR007656 -
Psa4g1276 500 PANTHER MYOSIN-BINDING PROTEIN 6-RELATED 1 486 - -
Psa4g1276 500 MobiDBLite consensus disorder prediction 222 241 - -
Psa4g1276 500 Pfam Zein-binding 324 414 IPR007656 -
Psa4g1276 500 MobiDBLite consensus disorder prediction 181 263 - -
Psa4g1276 500 Coils Coil 386 420 - -
Psa4g1276 500 MobiDBLite consensus disorder prediction 304 319 - -
Psa4g1276 500 PANTHER MYOSIN-BINDING PROTEIN 2 1 486 IPR039306 GO:0017022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1276 Psa-Chr4 89362581 89364209 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1276 - - lja:Lj4g3v1598220.1 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1276 4 89362581 89364209 Psa4g1276 4 89362581 89364209 ECH