Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1273 ATGGCTCACCGTTCTTCCCGGCGGCGAAACACTGCACCGCCGGAATCAACTCCACCTTCTGCTCCGGGAGGTCCGCCAGTTCCGGCAAAGCAACCTAGACCCACGATCTTCTCACCTTCTCCTTCTCATTACACTAAGCCAAACTCAGATTTGATTCAGGCTACTAAATCTTCTTTTTTGGTTAAACCCTTTCAAAGCCTTAACTTAGGTAGCAAAAAAACCAAACATTCTCAAACCAAACATGTTGACTCACGTTTGCAGACAAAATCCATGACAACCTCAGCTATATTCGAATCCTCAAAACCCAACAAAACCCACAACGCACAGAACACAGTACTAACACCAAAGCTTGAAAAAGAGAGTATTTTTTTGACCTCAAAGAAAACCCATAAAGAGAAACCTCATAAACCGGGTTCAGAATTGGAAAGGTGGAAACTTCAGGGGTTGTTAAAGAACGAGAAGAAGGAATCTTGTAAAGGGTGTGTTGTTGAAGATGTTAAAGATGTTAAAGATGAAAAATCAAGGAAAGTAGCTGTTGTGGAAGAAGCGAATGTTGTTAAGGAGAGAGTTTCTGTTCCTATGGGTCAAAGTGGTGGAAGAAGAAAATCGTTATGTGGATCAATGGTTGATTTAGGTGATTTCTTTGCAATCAATGGAGCGAAAATGGTGTCGGCTGATATGCCACCGTTTATGCAGATCCATGCTGTTGATTGTGCTAGAAAAGCTGTTGATAGTATGGAGAAATTCACTTCAAAAACCCTTGCATCTTCTCTCAAGAAGGAATTTGATGGGGTGTATGGGCCAGCATGGCACTGTATTGTGGGGACTAGTTTTGGTTCATTTGTCACCCATTCTGTTGGAGGGTTTCTATATTTCTCAATGGATCAGAAATTGTACATCCTTTTATTCAAGACTGCTGTACAAAAAGCAGATTGA 936 0.4145 MAHRSSRRRNTAPPESTPPSAPGGPPVPAKQPRPTIFSPSPSHYTKPNSDLIQATKSSFLVKPFQSLNLGSKKTKHSQTKHVDSRLQTKSMTTSAIFESSKPNKTHNAQNTVLTPKLEKESIFLTSKKTHKEKPHKPGSELERWKLQGLLKNEKKESCKGCVVEDVKDVKDEKSRKVAVVEEANVVKERVSVPMGQSGGRRKSLCGSMVDLGDFFAINGAKMVSADMPPFMQIHAVDCARKAVDSMEKFTSKTLASSLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSMDQKLYILLFKTAVQKAD* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1273 311 MobiDBLite consensus disorder prediction 36 51 - -
Psa4g1273 311 MobiDBLite consensus disorder prediction 1 51 - -
Psa4g1273 311 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 216 306 IPR037177 GO:0007017|GO:0030286
Psa4g1273 311 PANTHER DYNEIN LIGHT CHAIN 1 311 IPR001372 GO:0007017|GO:0030286
Psa4g1273 311 Pfam Dynein light chain type 1 221 305 IPR001372 GO:0007017|GO:0030286
Psa4g1273 311 MobiDBLite consensus disorder prediction 15 35 - -
Psa4g1273 311 MobiDBLite consensus disorder prediction 66 86 - -
Psa4g1273 311 SMART Dynein_light_2 215 305 IPR001372 GO:0007017|GO:0030286
Psa4g1273 311 SUPERFAMILY DLC 218 305 IPR037177 GO:0007017|GO:0030286
Psa4g1273 311 PANTHER INTRASTRAND CROSS-LINK RECOGNITION PROTEIN-LIKE 1 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1273 Psa-Chr4 89224004 89226396 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1273 - - gmx:100806149 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1273 4 89224004 89226396 Psa4g1273 4 89224004 89226396 ECH