Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1258 ATGGGAGAAAGTGAAACAACAATGAAAGCAATTGAGAAAGAAAGCTTTGAGATCAGTGGAAAACATGAATTTGAAGATGATGATCCTAAGATCATCTACAGAGGCTGGAAGGTCATGCCTTACATCATAGGAAATGAAATATTTGAGAAATTGGGAGCCATTGGAACATTAGCGAACCTGCTGGTTTATCTTACAACAGTATTCAACCTGGATAACGTCACAGCTGCGAACATCATCAACATCTTCAGTGGCAGTACCAACTTTTCTACCTTGCTTGGTGCTTTCTTCTCCGATACATTTTTCGGCCGCTACAAGACTTTAGCAGTCTGCTCAATTATTTGCTTTCTGGGATTGCTTGGAATAGAATTTACAGCATTATTCAAGAATCTTCATCCGCCACAGTGCAAAAAGGAAAGCGCAACATGCAAAGGACCAACTCCGGGACAAATCTTTTTTCTAATGTCGGCATTTGTTTTAATGATAATAGGTTCTGCAGGGGTTAGACCATGTAGTTTAGCTTTTGGTGTTGATCAATTCAATCCGAAAACAGATTCGGGAAAGAGAGGTATCAACAGTTTTTTCAATTGGTACTTTTTTACGGTTACTTTTGCACAGATGGTGTCTTTGACATTAATTGTGTATGTACAATCAAATGTGAGTTGGGCAATTGGTCTTGGAATTCCGGCTGCTTTGATGTTCATAGCTTGTGTCGTGTTTTTCGTCGGAACCAAATATTATGTTAGAATTAAACCAAATGGAAGTCCCATCAAAAGTATTGTTCAAGTTTTAGTGGTTGCAGTCAAGAAAAGAGGACTTAAACTACCTTCTCAGAATCCAATGCTTTCACTCTTTGATTATGTTCCACCTAGCTCTCTTAATTTAAAGCTTCCTTACACAAATCAATTCAGGGTTTTGGACAAAGCTGCAATAATCACTCCACGAGACACGATAAATCCAGATGGTTCAGCAGCTGATCCATGGAGTCTTTGCAGCATACAACAAGTTGAAGAGTTTAAGTGTTTGGTCAGATTATTACCTATATTCTTTTCAGGCATTTTGTTCTTTCTATCTCTCTCTCAACAACACACATTCCTTGTTTTTCAAGCTCTTCAATCAAATAGACGACTCGGAAATAGCAACTTCAACATACCTGGTGCATCATACCAGGTGGTCTTAATGTTGAGCATGACAATATGGTTAGCAATCTACGATAGATTAGTTGTTCCGTTCCTCCGAAGATTCACCGGAAAAGAAGCCGGAATCACACTCCTTCAAAGAGTTGGTGTTGGTATATTTCTATCTATACTATGTATGCTTGTATCTGCAGTAGTTGAGATACAAAGAAGACGCTTAGCTTTAACCGATCCGGTCGGAATTCTCCCGAGAAAAGGCGCGATTTCATCGATGTTGGGTTATTGGTTGGTTCCGCAGTTAATATTAGCTGGAGTTTCCGAAGCTTTTTGTGCTGTTGGACTAACTGAATTTTACTATAAACAGTTTCCTGAGAATATGAAAACCATTGCAGGGTCACTTTTCTTTTGTACCATGGCAGGATCAAGTTATTTGAGTGCTTTTCTTATCTCTATTGTTCATAAAACAACTTCGAATTCCGCAACAGGAAATTGGTTATCAGAAGATCTTAATAAGGGAAGATTAGAGTATTTTTATTACTTGATTGCTGCAATAGAACTCTTCAATTTTGGGTACTTTTTGATGTGTTCCAAATGGTTTAAGTATAGAGAAACTAGTAGTAGCATTAGTAGTGCATGA 1770 0.3814 MGESETTMKAIEKESFEISGKHEFEDDDPKIIYRGWKVMPYIIGNEIFEKLGAIGTLANLLVYLTTVFNLDNVTAANIINIFSGSTNFSTLLGAFFSDTFFGRYKTLAVCSIICFLGLLGIEFTALFKNLHPPQCKKESATCKGPTPGQIFFLMSAFVLMIIGSAGVRPCSLAFGVDQFNPKTDSGKRGINSFFNWYFFTVTFAQMVSLTLIVYVQSNVSWAIGLGIPAALMFIACVVFFVGTKYYVRIKPNGSPIKSIVQVLVVAVKKRGLKLPSQNPMLSLFDYVPPSSLNLKLPYTNQFRVLDKAAIITPRDTINPDGSAADPWSLCSIQQVEEFKCLVRLLPIFFSGILFFLSLSQQHTFLVFQALQSNRRLGNSNFNIPGASYQVVLMLSMTIWLAIYDRLVVPFLRRFTGKEAGITLLQRVGVGIFLSILCMLVSAVVEIQRRRLALTDPVGILPRKGAISSMLGYWLVPQLILAGVSEAFCAVGLTEFYYKQFPENMKTIAGSLFFCTMAGSSYLSAFLISIVHKTTSNSATGNWLSEDLNKGRLEYFYYLIAAIELFNFGYFLMCSKWFKYRETSSSISSA* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1258 589 CDD MFS_NPF1_2 39 577 - -
Psa4g1258 589 Gene3D MFS general substrate transporter like domains 10 585 IPR036259 -
Psa4g1258 589 PANTHER PEPTIDE/NITRATE TRANSPORTER 23 583 - -
Psa4g1258 589 SUPERFAMILY MFS general substrate transporter 53 580 IPR036259 -
Psa4g1258 589 Pfam POT family 104 542 IPR000109 GO:0016020|GO:0022857|GO:0055085
Psa4g1258 589 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 23 583 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1258 Psa-Chr4 88486249 88488555 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1258 22 588 Organic Solute Cotransporters AT5G62680 58.875 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1258 - - gmx:100814170 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1258 4 88486249 88488555 Psa4g1258 4 88486249 88488555 ECH