Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1250 ATGAACACGATGACGACGCCGTTTCAACAGGGGCCGCCGCAAACGGTGAGGAGATTGGTGGTGGAGGTTGTGGACGCGCGCAACCTACTACCCAAAGATGGTCAAGGAAGTTCAAGCCCATATGTTGTGGGTGACTTCGATGGTCAGAGAAAACGAACCACAACGCGGTTCAAGGAGCTGAACCCAGTTTGGAATGAGTCGCTTGAGTTTATCGTTTCAGACCCGGAGAATATGGAGTTTGAGGAGCTTGAAGTTGAGGTTTACAATGATAAAAAGTTTGGTAATGGTAGTGGACGCAAGAATCACTTTCTCGGTAGGGTTAAGCTCTATGGAACGCAATTCTCAGGTAGAGGAGAAGAGGCTCTGGTTTACTATACCTTAGAGAAGAAGAGTGTTTTCAGTTGGATAAGAGGTGAAATCGGTCTCAAGATTTATTACTATGATGAGTTGTTGCAGCAAGAAGAGCAACAACAACAACAGCAACAGGAGCAGCCACCGCCGCAAGAGGAGGAGCGGCCAGCCGGGATGGAGCAAGAGAGAAACAGACCTCAGATGATGGTTGAGGAGGGAAGGGTTTTTCAGGTTAATGGACCGATGGAGCATTGTGTTCCACTTCCAGATGGTCCTCCTTCGCCCCGCGTTGTGGTTGTTGAGGAATCACCATCTCCGGTGGTTCGTGTTCAACAGGATCCACCGTTGCCGGAGATGTACGGTCCTCCGGAACCGGAAATGCAGTACCACCAGCCGGAAGTGAGGAAAATGCAAGCAATTAGAAATGATAGAGTGAAGATTATGAAGAGACCAAACGGTGACTATGCGCCGAAAGATATCTCCGGCAAGAAACCAAATGGTGAGTCTGAGAGGATTCATCCCTACGATCTAGTGGAGCCAATGCAGTATCTGTTTGTCAGAATCGTGAAGGTTCGTGGTCTTAATCCTTCAACTGAAAGCCCATTCGTGAAGGTTCGAACATCCAGTCACTACTTGAGATCAAAGCCGGCAAGTTATCGTCCAAACGAGCCAAACGACTCACCGGAGTGGAATCAAGTTTTTGCCCTAGGTTACAGCAAGACCGACGCAACTGGTGCAACATTAGAGATTTCCGTTTGGGATTCACCTACAGAGCAATTTCTCGGTGGCGTTTGCTTTGATCTTTCTGATGTACCTATCCGAGACTCTCCAGATAGTCCTCTTGCTCCACAATGGTACCGTCTCGAAGGAGGTGCTGCCGAACAAAACTCCGGCAGTGTCTCCGGCGATGTTCAGCTATCTGTTTGGATCGGGACTCAATCTGACGATGCCTTTCCAGAAGCATGGAGCTCTGATGCACCGTATGTGGCACACACTCGTTCCAAGGTTTACCAATCACCTAAGCTTTGGTACCTTCGCGTTACAGTAATGGAAGCACAAGACCTAAATCTGACTCCAAATCTACCTCCATTAACAACACCAGAAATAAGAGTTAAGGTCCAATTAGGGTTTCAATCACAGAGAACGAGACGAGGCTCAATGAACCATCACAGCATGTCGTTTCACTGGCACGAAGACCTTCTATTCGTAGCCGGAGAGCCTCTAGAAGATTCCATGGTCCTTCTGGTGGAAGATCGAACCACCAAGGAAGCGGCACTCCTTGGCCACGTGGTGATTCCTCTTACTTCTATTGAACAGCGAATAGACGACCGCCACGTGCCTGCCAAGTGGTTCCCACTGGAAGGTGGATCCTACTGCGGGCGAGTCCACCTACGCCTCTGCCTGGAAGGTGGATATCACGTGCTTGACGAAGCGGCGCACGTGTGCAGCGATTTCCGGCCCACTGCAAAATCTCTCTGGAAACCTGCCGTTGGAATTCTTGAACTTGGAATCCTAGGCGCTCGTGGTCTCCTCCCTATGAAATCCAAGGGTCCAGGAAAAGGGTCCACGGATGCTTACTGTGTAGCCAAGTATGGGAAAAAGTGGGTCCGAACCCGAACCGTAACAGATAGCTTCGACCCACGCTGGAACGAACAGTATACATGGCAGGTTTATGATCCATGCACCGTCTTAACCGTTGGTGTTTTTGACAACTGGCGAATGTTTGCTGACGTGTCCGAAGAAAAACCCGATTGCCGTATAGGCAAAGTTCGTATACGGGTTTCTACTCTAGAAAGCAACAAAATCTACACAAGTTCATATCCATTACTGGTTTTAACTCGAACCGGTTTAAAGAAAATGGGTGAAATCGAATTAGCGGTTCGTTTCGCAAGCCCCTCGTTTCTACCCGACATGTGTGCAGTTTACGGCCAACCATTACTTCCAAAAATGCACTACATCCGCCCACTTGGGGTGGCTCAACAGGAAGCTCTCCGTGGCGCAGCTACCAAGATGGTGGCACAGTGGCTGGCGCGGTCTGAGCCACCAATGGGACACGAGGTTGTTCGTTACATGTTGGATGCTGACTCACACGCTTGGAGCATGAGGAAAAGTAAAGCGAATTGGTTTAGAATTGTGGCAGTCTTAGCTTGGGCCGTTGGATTAGCAAAATGGTTAGATGATATCAGAAGATGGAAAAATCCAGTTACAACGGTTTTGCTTCATATACTCTACTTAGTTCTTGTTTGGTATCCAGATTTAATAGTTCCAACCGGGTTTTTATACGTGGTTTTAATTGGGATATGGTATTTCCGTTTTAGACCTAAAATACCTGCCGGTATGGATACCCGTTTATCACAAGCCGAATCTGTTGATCCGGATGAATTAGACGAAGAATTTGACACCATGCCTAGCTCCAAACCACCTGATATGGTTCGGGTTCGTTATGACAGGTTAAGGATGTTGGCTGCGAGGGTGCAAACGGTTTTAGGTGATTTTGCAACACAAGGGGAAAGGGTTCAAGCATTGGTTAGTTGGAGGGACCCAAGAGCTACCAAATTGTTCATTGGAGTGTGTTTTGTTATTGCTGTCATACTCTATTCTGTGCCTCCAAAAATGGTTGCTGTGGCTTTAGGATTCTATTACCTCCGTCATCCAATGTTTCGGAACCCAATGCCGCCGGCTAGTTTGAACTTTTTCCGGCGACTTCCTAGCTTGTCTGATCGGTTGATGTAG 3084 0.4809 MNTMTTPFQQGPPQTVRRLVVEVVDARNLLPKDGQGSSSPYVVGDFDGQRKRTTTRFKELNPVWNESLEFIVSDPENMEFEELEVEVYNDKKFGNGSGRKNHFLGRVKLYGTQFSGRGEEALVYYTLEKKSVFSWIRGEIGLKIYYYDELLQQEEQQQQQQQEQPPPQEEERPAGMEQERNRPQMMVEEGRVFQVNGPMEHCVPLPDGPPSPRVVVVEESPSPVVRVQQDPPLPEMYGPPEPEMQYHQPEVRKMQAIRNDRVKIMKRPNGDYAPKDISGKKPNGESERIHPYDLVEPMQYLFVRIVKVRGLNPSTESPFVKVRTSSHYLRSKPASYRPNEPNDSPEWNQVFALGYSKTDATGATLEISVWDSPTEQFLGGVCFDLSDVPIRDSPDSPLAPQWYRLEGGAAEQNSGSVSGDVQLSVWIGTQSDDAFPEAWSSDAPYVAHTRSKVYQSPKLWYLRVTVMEAQDLNLTPNLPPLTTPEIRVKVQLGFQSQRTRRGSMNHHSMSFHWHEDLLFVAGEPLEDSMVLLVEDRTTKEAALLGHVVIPLTSIEQRIDDRHVPAKWFPLEGGSYCGRVHLRLCLEGGYHVLDEAAHVCSDFRPTAKSLWKPAVGILELGILGARGLLPMKSKGPGKGSTDAYCVAKYGKKWVRTRTVTDSFDPRWNEQYTWQVYDPCTVLTVGVFDNWRMFADVSEEKPDCRIGKVRIRVSTLESNKIYTSSYPLLVLTRTGLKKMGEIELAVRFASPSFLPDMCAVYGQPLLPKMHYIRPLGVAQQEALRGAATKMVAQWLARSEPPMGHEVVRYMLDADSHAWSMRKSKANWFRIVAVLAWAVGLAKWLDDIRRWKNPVTTVLLHILYLVLVWYPDLIVPTGFLYVVLIGIWYFRFRPKIPAGMDTRLSQAESVDPDELDEEFDTMPSSKPPDMVRVRYDRLRMLAARVQTVLGDFATQGERVQALVSWRDPRATKLFIGVCFVIAVILYSVPPKMVAVALGFYYLRHPMFRNPMPPASLNFFRRLPSLSDRLM* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1250 1027 MobiDBLite consensus disorder prediction 155 185 - -
Psa4g1250 1027 Gene3D C2 domain 446 585 IPR035892 -
Psa4g1250 1027 SMART C2_3c 18 123 IPR000008 -
Psa4g1250 1027 SMART C2_3c 300 397 IPR000008 -
Psa4g1250 1027 SMART C2_3c 461 563 IPR000008 -
Psa4g1250 1027 SMART C2_3c 616 723 IPR000008 -
Psa4g1250 1027 MobiDBLite consensus disorder prediction 170 185 - -
Psa4g1250 1027 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 615 767 IPR035892 -
Psa4g1250 1027 CDD C2D_MCTP_PRT_plant 616 743 - -
Psa4g1250 1027 ProSiteProfiles C2 domain profile. 440 568 IPR000008 -
Psa4g1250 1027 Gene3D C2 domain 14 183 IPR035892 -
Psa4g1250 1027 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 300 445 IPR035892 -
Psa4g1250 1027 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 14 1027 - -
Psa4g1250 1027 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 460 606 IPR035892 -
Psa4g1250 1027 Gene3D C2 domain 294 427 IPR035892 -
Psa4g1250 1027 CDD C2C_MCTP_PRT_plant 461 604 - -
Psa4g1250 1027 CDD C2B_MCTP_PRT_plant 300 429 - -
Psa4g1250 1027 ProSiteProfiles C2 domain profile. 282 403 IPR000008 -
Psa4g1250 1027 Pfam C2 domain 300 404 IPR000008 -
Psa4g1250 1027 Pfam C2 domain 18 110 IPR000008 -
Psa4g1250 1027 Pfam C2 domain 615 726 IPR000008 -
Psa4g1250 1027 Pfam C2 domain 460 570 IPR000008 -
Psa4g1250 1027 ProSiteProfiles C2 domain profile. 598 724 IPR000008 -
Psa4g1250 1027 PANTHER BNAA10G16860D PROTEIN 14 1027 - -
Psa4g1250 1027 Pfam Plant phosphoribosyltransferase C-terminal 872 1027 IPR013583 -
Psa4g1250 1027 Gene3D C2 domain 613 750 IPR035892 -
Psa4g1250 1027 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 18 162 IPR035892 -
Psa4g1250 1027 CDD C2A_MCTP_PRT_plant 18 148 - -
Psa4g1250 1027 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1250 Psa-Chr4 88036844 88039927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1250 5 1027 Lipid Metabolism Gene Families AT1G74720 69.835 0.0 1544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1250 - - gmx:100783882 1762.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1250 4 88036844 88039927 Psa4g1250 4 88036844 88039927 ECH