Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1201 ATGGAATCGGCGGGACAGTGGCTGGAGAAAGCGTTGGTGGAGTTGTGTTCTAAGATCGAAACTGGTTTGGGTTTAGGTTTAGATGAAGAGATTATAAAAGGGCTTGTTTCTTACTGTGATCTTGCTCAGCCACGAGATGCTAAAGAGTACCTTGACAATATTATTGGTCAAGAAGTAGGGAAACCTGTGATTGAAGAATACCTAAGACGGAGAGGTCACTCAGAATTTAGCACTAAATCAGATGTTCCAACTACTACATTACATGCCTATGTCAAACCACCTGCAGTTGAAACATCTGCTAGTGGGTCTAAGAAATCGATGAGAACACCAAAAACAGTAACTGTCCGCAGTGACCATGCAGAACCCAGCAAAAATGTTGTTGGCGGTAGTAAGGACAATGGGATTCCGGCTACAGGTAGTGAATCAAAAACATCACAAAAAGGAAACCAAGTGAGTTCCAAAAAGAAGAAAGCTGGGAAAACTATTTCACTTGCTGAGGCAGCCAAGGGATCGATTGTGTTCCAGCAAGGAAGACCATGCTCTTGTCAAGCGCGTCGTCACATGCTGATCAGCAATTGCTTATCATGTGGTAAAATCGTTTGTGAGCAAGAAGGAGAAGGGCCTTGCAATTTTTGTGGTGCACTTGTGTTGAAAGAGGGCAGCTCATATGCTGGTCTGGAAGAAAGTTTGCCTCCCTTATCAGATGCCGAGGCTGCTGCTGAAGCTTACGCAAAGAGGCTTGTCGATTATGACCGAAATGCCGCAGCTCGTACAACAGTTATTGATGACCAAAGTGACTACTATGAGCTTGATGGAAATACTTGGTTATCAAAGGAGGAGAAAGAACTATTGAAGAAGAAACAAGAAGAGGTGGAAGAAGCTGAACGAGCAAAACGGAATAAAGTTGTTGTGACTTTTGACCTAGTTGGCCGAAAGGTTCTTCTGAATCAAGATGAAGTTTCAGAATCAAAGTCCGACAATAGAATATTACGTGCACCAGATGAAAGAGAAGTGAACCGCATTAAACCAAACCCAACTCTTAAGATTCAGCCAGTTTTTGTGGATCTGGGCTTCACTAAGAAGTCTGCTATCGATAGGCAAGCGAACAAAGGTAAGCAATCAAACAAAGGTTTAAACAAGGGGCTGTGTTTAGAGATTACTGGGAGGGTTCAGCATGATAGCAATGACTTGAAGTACCTTCAGCAAAGCCAATTCCCAACAGATTCAAATGAAAAAAATTGGCGAGTACCGTCAGGAAATGGAGGGCTACATGTTGAAGATGACGGTGAATGTTTACTGGAACTATGA 1308 0.4289 MESAGQWLEKALVELCSKIETGLGLGLDEEIIKGLVSYCDLAQPRDAKEYLDNIIGQEVGKPVIEEYLRRRGHSEFSTKSDVPTTTLHAYVKPPAVETSASGSKKSMRTPKTVTVRSDHAEPSKNVVGGSKDNGIPATGSESKTSQKGNQVSSKKKKAGKTISLAEAAKGSIVFQQGRPCSCQARRHMLISNCLSCGKIVCEQEGEGPCNFCGALVLKEGSSYAGLEESLPPLSDAEAAAEAYAKRLVDYDRNAAARTTVIDDQSDYYELDGNTWLSKEEKELLKKKQEEVEEAERAKRNKVVVTFDLVGRKVLLNQDEVSESKSDNRILRAPDEREVNRIKPNPTLKIQPVFVDLGFTKKSAIDRQANKGKQSNKGLNKGLCLEITGRVQHDSNDLKYLQQSQFPTDSNEKNWRVPSGNGGLHVEDDGECLLEL* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1201 435 MobiDBLite consensus disorder prediction 88 158 - -
Psa4g1201 435 Coils Coil 277 304 - -
Psa4g1201 435 PANTHER THYROID RECEPTOR INTERACTING PROTEIN RELATED 3 434 IPR039128 -
Psa4g1201 435 Coils Coil 233 253 - -
Psa4g1201 435 MobiDBLite consensus disorder prediction 135 157 - -
Psa4g1201 435 Pfam Putative zinc finger motif, C2HC5-type 178 218 IPR009349 GO:0005634|GO:0006355|GO:0008270
Psa4g1201 435 PANTHER TRANSCRIPTION REGULATOR/ ZINC ION BINDING PROTEIN 3 434 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1201 K23398 - gmx:100810833 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1201 4 85386506 85389655 Psa4g1201 4 85386506 85389655 ECH