Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1172 ATGAAGATAATTGTTATTATTGTAGCCATCATTTTCGGAATTAAGCTTGAAGGATTCGATTGTAAGATTGTGCAATTCATTTTTGGAGACTCTCTTTCTGATGTTGGAAACAATAAGCATCTCTCCAGAAGCCTTGCTCAAGCAAACCTCCCTTGGTATGGTATAGACATGGGTAATGGGTTGCCTAATGGAAGATTCTCTAATGGTCGCACCGTTGCTGATATTATCGGTGACAATTTAGGCCTACCTAGGCCACCTCCGGTCCTAGACGCATCTTTAACCGAGAAAGATATACTAATAAATGGATTGAACTATGCTTCTGGTGGTGGTGGAATCTTGAATGAAACCGGCACTTATTTTATTGAAAAGTTATCACTAGACAAACAAATCGAACTCTTCCAAGGGACACAAGAACTAATCAGAAGCAAAATCGGAAAAAGAGCTGCGGAGAACTTTTTTCGAGAAGCTCGTTATGTTGTTGCTTTAGGTAGCAATGACTTTATCAACAACTACTTGATGCCTGTTTACACTGATTCATGGACATACAATGATGAAACCTTCATGGACTACTTGATAGGAACGCTAAGAAGACAACTAAAGGTTCTTCATAGTTTAGGAGCAAGACAGTTGATGGTGTTTGGGTTGGGTCCAATGGGCTGCATTCCACTTCAAAGGGTGCTTACCACAACTGGAAATTGTAGAGAAAAAGTTAACAAACTAGCTGTTGCTTTTAATAAAGCTTCAAGTGAACTCGTCGATGAATTGGCGAAACAACTTCCGAATTCAAACTATAGATTCGGAGATGCGTATGATGTTGTCTCTGATTTGATTAGTAATCCGGCTAAGTACGGATTCGAAAACTCAGACTCGCCATGTTGTTCGTTTGGGAGGATCCGACCCGCGCTTACATGTCTACCTGCGTCAATACTATGCTCCGACCGAAGCAAATACGTGTTTTGGGACGAGTATCATCCCTCGGACAGTGCTAATGAACTAATTGCAAATGAACTTATTAAGAAATTTGGATTTTCGCGCGTTGATCAAGTTGCGTCTCCTTCACCAGCACCTTCTATTGCTCCATCTCCACAAGAATAA 1095 0.4082 MKIIVIIVAIIFGIKLEGFDCKIVQFIFGDSLSDVGNNKHLSRSLAQANLPWYGIDMGNGLPNGRFSNGRTVADIIGDNLGLPRPPPVLDASLTEKDILINGLNYASGGGGILNETGTYFIEKLSLDKQIELFQGTQELIRSKIGKRAAENFFREARYVVALGSNDFINNYLMPVYTDSWTYNDETFMDYLIGTLRRQLKVLHSLGARQLMVFGLGPMGCIPLQRVLTTTGNCREKVNKLAVAFNKASSELVDELAKQLPNSNYRFGDAYDVVSDLISNPAKYGFENSDSPCCSFGRIRPALTCLPASILCSDRSKYVFWDEYHPSDSANELIANELIKKFGFSRVDQVASPSPAPSIAPSPQE* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1172 364 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 2 354 - -
Psa4g1172 364 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 354 - -
Psa4g1172 364 SUPERFAMILY SGNH hydrolase 156 340 - -
Psa4g1172 364 CDD SGNH_plant_lipase_like 26 340 IPR035669 -
Psa4g1172 364 Pfam GDSL-like Lipase/Acylhydrolase 26 336 IPR001087 GO:0016788
Psa4g1172 364 Gene3D SGNH hydrolase 25 341 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1172 Psa-Chr4 83295928 83299395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1172 26 337 Acyl Lipid Metabolism Gene Families AT4G10950 33.121 1.01e-62 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1172 - - gmx:100815129 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1172 4 83295928 83299395 Psa4g1172 4 83295928 83299395 ECH