Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1170 ATGAGGGGTCGTTCTTCTTCCGCCGCCACCGCCGCCACCGCCAGTCGTGAAAGGAGGAGAAGAACAAACTCAACCTCGCCGTTGAAGGATCGAACCAGAACCACTTCATCTAGGTTATCATCTCCATCCGAACGAAGCTCTTCTACCTCTGCTGCTACCACTCTACTCGATGATGACCTAAACGTTGCTCCCTTTGGTGAATACTCTCACCCTAATCCTCGATCCTTCTCACTCAATGTTAAACAGAAATGTTGGGAAAAAGCTGACAAGGTTAAGGGACGGGACCCCGATCGATGGCGAAGGGATCCTCTCGGGAATCTTATCTTTCGAAAGCTTGTAGGTTGCCCTGGTTGTCTCTGTCATGACTATGATCACATTGTTCCATATTCTAAGGGGGGCCAAAGCACGCTGGAAAATTGTCAAGTATTACAGGCAACAGTTAATCGATCAAAGGGTAATCGAACAGATATCTCCAGATCGGATCTTATTCAGAAGAGTTCTTATTGCAGGGTTTCAGATCGTGATATGGATATGCTGGAATTGTCTGCTTTTGGCAATGTTCGGCGTGGACAAGATACCGGAGGATGTAGAATTCAATGA 600 0.47 MRGRSSSAATAATASRERRRRTNSTSPLKDRTRTTSSRLSSPSERSSSTSAATTLLDDDLNVAPFGEYSHPNPRSFSLNVKQKCWEKADKVKGRDPDRWRRDPLGNLIFRKLVGCPGCLCHDYDHIVPYSKGGQSTLENCQVLQATVNRSKGNRTDISRSDLIQKSSYCRVSDRDMDMLELSAFGNVRRGQDTGGCRIQ* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1170 199 SMART HNH_5 103 149 IPR003615 -
Psa4g1170 199 Pfam HNH endonuclease 121 154 IPR002711 GO:0003676|GO:0004519
Psa4g1170 199 Gene3D - 80 172 - -
Psa4g1170 199 MobiDBLite consensus disorder prediction 1 53 - -
Psa4g1170 199 CDD HNHc 107 152 IPR003615 -
Psa4g1170 199 PANTHER HNH ENDONUCLEASE 15 199 - -
Psa4g1170 199 PANTHER HNH ENDONUCLEASE 15 199 - -
Psa4g1170 199 MobiDBLite consensus disorder prediction 28 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1170 Psa-Chr4 83291580 83294199 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1170 - - gmx:100500174 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1170 4 83291580 83294199 Psa4g1170 4 83291580 83294199 ECH