Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1157 ATGGGGAGAGAGAATGGTGCGACATTAGTTCACAAGAGAAACACTAACACAGCTTTACCAACCACCTATTCCAACGACAAAAACCGCCGTAACCGTTCTAAAACATTCAACAATGTTAAAATCACTATCCTCTGCGGTTTTGTCACCATCCTCGTCCTACGTGGCACCATCGGTGTTAATTTCGGTTCTTCCGACTCCGACGCCGTCAACCAGAGCGTCATCGAAGAAACCAACCGCATCCTCGCTGAGATCCGATCCGATGCTGACCCTTCTGATCCCGACAACAAAGAGGAAACCTTTTTCAATCCGAACGCCACTTTCACGCTTGGTCCCAAAATCTCCGATTGGGATTCTCAGCGTAAGAGTTGGCTTCATCAAAACCCTGAATACCCTAGTTTTGTTAGAGGTAAAGCTCGAATATTGCTTCTTACTGGGTCTCCTCCTAAGCCTTGTGATAACCCAATTGGGGATCATTATTTGTTGAAGTCTATTAAGAATAAGATTGATTATTGTAGATTACATGGGATTGAGATTGTTTATAATATGGCTCATCTTGATATGGAGCTTGCTGGTTATTGGGCTAAATTGCCTATGATTAGGAGGTTGATGTTGTCGCATCCTGAGGTTGAGTGGATTTGGTGGATGGATAGTGATGCTTTTTTCACTGATATGGTTTTTCAGCTTCCTTTGTTCAAGTATGATGACTATAATATGGTTATCCATGGTTACCCTGATTTGTTGTTTGAGCAAAAGTCTTGGATTGCTATCAATACTGGGAGTTTTCTTTTTAGGAATTGTCAGTGGTCTTTGGATTTGCTGGATGACTGGGCTCCCATGGGTCCTAAAGGTCCGGTTCGGGAAGAGGCCGGGAAGGTTTTGACTGCTAATCTTAAGGGAAGGCCGGCGTTTGAGGCGGATGATCAGTCTGCGTTGATATATTTGTTGCTGTCTAAGAAGAAAAAGTGGATGGATAAGGTGTTTCTTGAGAATTCTTACTATTTGCATGGTTACTGGGCTGGGTTGGTTGATAGGTATGAGGAGATGATTGAGAAGTATCATCCGGGATTAGGAGATGAGAGGTGGCCGTTTGTGACGCATTTCGTGGGTTGTAAGCCGTGTGGAAGCTATGGAGATTATCCTGTTGAGAGGTGTCTTAGTAGTATGGAGAGGGCTTTCAATTTTGCTGATAATCAGGTGCTTAAACTCTATGGGTTCAGACATCGCGGTCTGTTGAGTCCTAAGATTAAGAGAATCAGAAATGAGACGGTTACTCCTTTGGAGTTTGTCGACCAGTTTGATATTCGAAGGCATCCTACGGAGAAGAGTGAATCGAAAAGCTAG 1341 0.4362 MGRENGATLVHKRNTNTALPTTYSNDKNRRNRSKTFNNVKITILCGFVTILVLRGTIGVNFGSSDSDAVNQSVIEETNRILAEIRSDADPSDPDNKEETFFNPNATFTLGPKISDWDSQRKSWLHQNPEYPSFVRGKARILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNMAHLDMELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFQLPLFKYDDYNMVIHGYPDLLFEQKSWIAINTGSFLFRNCQWSLDLLDDWAPMGPKGPVREEAGKVLTANLKGRPAFEADDQSALIYLLLSKKKKWMDKVFLENSYYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEFVDQFDIRRHPTEKSESKS* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1157 446 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 20 439 - -
Psa4g1157 446 Pfam galactosyl transferase GMA12/MNN10 family 137 375 IPR008630 GO:0016021|GO:0016757
Psa4g1157 446 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 137 282 IPR029044 -
Psa4g1157 446 MobiDBLite consensus disorder prediction 1 31 - -
Psa4g1157 446 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 20 439 IPR008630 GO:0016021|GO:0016757
Psa4g1157 446 MobiDBLite consensus disorder prediction 9 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1157 Psa-Chr4 82937868 82939208 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1157 33 440 Glycosyltransferase AT1G74380 85.330 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1157 K08238 - gmx:100793238 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1157 4 82937868 82939208 Psa4g1157 4 82937868 82939208 ECH