Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1142 ATGACAGAGGAAATTAGTGATAATCAAGTGGAGTCTGAGATGATTGAGCCAGAAGATGTTGATGAGAAAGCAAATCCTAATGAAGATTCAATCATCGCACGCGGAGAGGAAATTGATGTTAATCAAGCAGAGACTGAGATGATTGAGCCAGAAGATGTTGATGAGAAAGAAAATCCTAATGAGGGTTTAATCATCACAAAAGGTCCGCCTAAGATTCTTTCGCGTTATCGTTGTGAGCGTAGGACTTCCTGCCATGATTTATGCAAATATGGTATCCGGCATGCCACCGAAGAAAAACCATGGAAAACAGCAAAGAAAATGAGGGAAAGAAAAGCCAATGTAACTTCATTGGAAGGGACTGATAGTTCAGGAAGAAGTTCAAAACTCGGAGATCATAATTATCGTGTTGACATCAAGGAAGTAATAACAAATAATAAAACAGCCATTTCCGAGAAAAATTCAACACCTTACGAAGAAATAGACGTTTCCATGGAGCATAATAACAGCGACATTGTACGAGAAAGTTCTGAGGTATCTTCTCTTCATGTGAAGGAATGTTCCAAAAGTCAAAGAAAATGGGAGTTAGTCAAAAACAAATGTGCTTTTGGTTCAAGCAGCAGAAAAGAAACTACAATCAGAAGCAACCAGAAAACAACATCTTCCAATGGAGGCAAGGATAAATCATCAGCATCAAGCTTTCTCTTGTCTCCAAAACAAAATGTCAAGAAATCTTCAAGCTCAAGTGAGACTGCCAAAAACTTGAAAAAAGTGTCTTCTGGGAAAAATCATGAGAATGGTAAAGAAGCCAAACCTGAATTAGCCAACAATGACAATTTACCAGAGAAAATTTTGCATGCCATTGAACCAACCTCAGAAAATCTATCTAAGGAACCTACTCGGGCTTGTAATGCAACTAAGCCAACTTCTCCTTCACCTTCACCGTCAAAGGACAAAAGCTTAAAGAGGACCGGTAAGAAAACCGGTAAGTCTGCGGTGTCTGCATCTTCAAGGAAAGGCCTTAGACATGTTGGACATGGAACACTCACTCATCAATCCTCCGGGAACAAATTCAAAACAAACATACAGCTTAAAACACACATTGTTTCACGATCACCATCAGCGTTATCATCTGTTTCTTCATCTAACACTTCCCTCAGAAAACAAAATGGTACTACTTCTAAGCCCAGCAAAACAGGACATGTTAATCAGGGTGAACATTTGAAGGTAGGGTACAAAATGAGGCCAAAAATGACCACAATAGTTGGGGTAGCAAATAAAGCTATTCCATCAAGGAAGCTAACTTTTAGCAGAGGAAAGGTGATTGAAATTCAGCCTCAAAGCAACAATATTCCAAGGAGACTCAAATTCAAGCCGGTGCGCTTTCTCGGCGATGACGCCAGAAGAGATGCAAATGGCACAAGAAAAAGGATCATTACCAATAAGGAAGCTGACGGTGCTGAGTTAAATGCTGCAAGTATCAAAACTGAGAATATTGATCTTAAACACCAAACAATGGAAAGAGGTAAAAACAGAAGTTTTGCGAGAAAGGCTGGTGGTGTAGATAGAACCAAGGTATCTGGTTCAAAATCAGGATCTGAGAAAGTTGTTTTGAGGCATCAAGACGTAGAAGGGAGAAAACAAAATACAGGTTTGTATAATAATGTCATTGAAGAAACTGCAACCAAACTTGCTGGACTAAGGAAGAGCAAGGTCAGGGCTCTAGTTGGTGCATTTGAAACTGTGATATCTCTTGATTCTCCTAGAGAGTCCGCAACTGCAGAAGTGAGTACAGTTTGTTGA 1800 0.3972 MTEEISDNQVESEMIEPEDVDEKANPNEDSIIARGEEIDVNQAETEMIEPEDVDEKENPNEGLIITKGPPKILSRYRCERRTSCHDLCKYGIRHATEEKPWKTAKKMRERKANVTSLEGTDSSGRSSKLGDHNYRVDIKEVITNNKTAISEKNSTPYEEIDVSMEHNNSDIVRESSEVSSLHVKECSKSQRKWELVKNKCAFGSSSRKETTIRSNQKTTSSNGGKDKSSASSFLLSPKQNVKKSSSSSETAKNLKKVSSGKNHENGKEAKPELANNDNLPEKILHAIEPTSENLSKEPTRACNATKPTSPSPSPSKDKSLKRTGKKTGKSAVSASSRKGLRHVGHGTLTHQSSGNKFKTNIQLKTHIVSRSPSALSSVSSSNTSLRKQNGTTSKPSKTGHVNQGEHLKVGYKMRPKMTTIVGVANKAIPSRKLTFSRGKVIEIQPQSNNIPRRLKFKPVRFLGDDARRDANGTRKRIITNKEADGAELNAASIKTENIDLKHQTMERGKNRSFARKAGGVDRTKVSGSKSGSEKVVLRHQDVEGRKQNTGLYNNVIEETATKLAGLRKSKVRALVGAFETVISLDSPRESATAEVSTVC* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1142 599 MobiDBLite consensus disorder prediction 101 115 - -
Psa4g1142 599 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 36 599 - -
Psa4g1142 599 MobiDBLite consensus disorder prediction 292 317 - -
Psa4g1142 599 MobiDBLite consensus disorder prediction 204 399 - -
Psa4g1142 599 SMART CaM_binding_2 471 583 IPR012417 GO:0005516
Psa4g1142 599 MobiDBLite consensus disorder prediction 346 399 - -
Psa4g1142 599 MobiDBLite consensus disorder prediction 1 18 - -
Psa4g1142 599 PANTHER EMB|CAB62594.1 36 599 - -
Psa4g1142 599 MobiDBLite consensus disorder prediction 101 131 - -
Psa4g1142 599 Pfam Plant calmodulin-binding domain 509 583 IPR012417 GO:0005516
Psa4g1142 599 Pfam Plant calmodulin-binding domain 432 511 IPR012417 GO:0005516
Psa4g1142 599 MobiDBLite consensus disorder prediction 204 255 - -
Psa4g1142 599 MobiDBLite consensus disorder prediction 256 275 - -
Psa4g1142 599 MobiDBLite consensus disorder prediction 1 44 - -
Psa4g1142 599 MobiDBLite consensus disorder prediction 19 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1142 Psa-Chr4 82245937 82249018 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1142 - - mtr:MTR_4g109220 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1142 4 82245937 82249018 Psa4g1142 4 82245937 82249018 ECH