LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa4g1128	ATGGTAAAGAAGATCTGTGGAATTGGAGCTGGATATGTAGGGGGTCCAACGATGGCGGTTATAGCCCTCAATTGTCCTTCGATTGAAGTAGCCGTTGTCGACATCTCTCACTCCAGGATATCAGCTTGGAACAGCGACAAACTCCCTATCTACGAACCTGGCTTAGAACAAATTATACAACAATGTAGAGGAAAGAATCTCCACTTCAGCACCGATGTAGAAAAACATGTTTACGAAGCTGATATAATCTTTGTTAATGTTAACACGCCAACAAAAACTGGAGGCCGTGGAGCTGGCAAAGCTGCAGATTTAACTTATTGGGAAAGTGCAGCGAGGATGATAGCCGATGTTTCAAGATCAAACAAGATTGTTGTCGAGAAATCAACTGTTCCGGTTAGAACAGCTGAAGTAATTGAGAAAATTCTAGTTCACAATAGCAATGGCAAGGTCGAGTATCAAATTTTGTCAAATCCTGAGTTTCTTTCCGAAGGAACATCTATTCAGGATCTTCTAAATCCTGATAGGGTTCTAATCGGAGGAAACGATAGTCTTAAAGGTCAAGAAGCCATTCAAAAACTGAAAGCTATATATGCTAACTGGGTGCCTGAAGACAGAATTATAACTACAAATGTTTGGTCTGCTGAACTCTCTAAGTTAGCTGATAACGCTTTTTTGGCTCAAAGGATTTCGTCTATTAATGCTATGTCGGCTTTATGCGAGTCTACTGGTGCAGATATTTCACAGGTTTCTTGTGTTTTAAGTAAAAACACTAAACTTGGTTCTAGATACTTAAATGCTAGTGTTGGTTTTGGTGGTTCTTGTTTTCAAAAAGATATCCTTAACTTGGTATATATATGCGAGTGTAATGGACTCGTCGAAGTCGCTAATTATTGGAAAGAGGTGATTAAGGTGAATGACTATCAAAAGAGTAGGTTTGTGAAAAAGGTTATAACATCTATGTTTAATACAGTTTCAGGTAAGAAGATTGCTGTTCTAGGATTTTCCTTTAAGAAAGATACTAGTGATACTAGGAAAACTCCTGCGATCGATGTTTGCAAAGGACTTTTGGCAGATAACGCTTGTTTGAGCATTTACGATCCGCGGGTTAGTGAAGAACAGATTCGAAGGGATTTGTCTATGAATGAGATTCCATGGGAGAATTCAATCATGGCGGAGGCAATGAGGTTCGATGGTACGAAACAGGTTAGTGTGTATGAGGATGTTTATGAGGCGACAAAAGATGCTCACGGGATATGTGTTCTTACAGAATGGGATGAGTTCAAGGAAATTGATTATCAAAGAGTGTTTGAAAGCATGGAGAAGCCAGCATTTGTTTTTGATGGTAGAAATGTTTTGGATGTTGATAAGTTGAGGGAGATTGGGTTTATTGTGTACTCAATTGGGAAGCCATTGAAGCAGTGGCAGAGTTGCTAG	1434	0.394	MVKKICGIGAGYVGGPTMAVIALNCPSIEVAVVDISHSRISAWNSDKLPIYEPGLEQIIQQCRGKNLHFSTDVEKHVYEADIIFVNVNTPTKTGGRGAGKAADLTYWESAARMIADVSRSNKIVVEKSTVPVRTAEVIEKILVHNSNGKVEYQILSNPEFLSEGTSIQDLLNPDRVLIGGNDSLKGQEAIQKLKAIYANWVPEDRIITTNVWSAELSKLADNAFLAQRISSINAMSALCESTGADISQVSCVLSKNTKLGSRYLNASVGFGGSCFQKDILNLVYICECNGLVEVANYWKEVIKVNDYQKSRFVKKVITSMFNTVSGKKIAVLGFSFKKDTSDTRKTPAIDVCKGLLADNACLSIYDPRVSEEQIRRDLSMNEIPWENSIMAEAMRFDGTKQVSVYEDVYEATKDAHGICVLTEWDEFKEIDYQRVFESMEKPAFVFDGRNVLDVDKLREIGFIVYSIGKPLKQWQSC*	478

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa4g1128	477	PANTHER	UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE	4	474	IPR028356	GO:0003979
	Psa4g1128	477	SMART	UDPG_MGDP_dh_C_a_2_a	330	454	IPR014027	GO:0016616\|GO:0051287
	Psa4g1128	477	Pfam	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain	330	453	IPR014027	GO:0016616\|GO:0051287
	Psa4g1128	477	Pfam	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain	4	186	IPR001732	GO:0016616\|GO:0051287
	Psa4g1128	477	PANTHER	UDP-GLUCOSE 6-DEHYDROGENASE 1	4	474	-	-
	Psa4g1128	477	Gene3D	-	211	242	-	-
	Psa4g1128	477	Gene3D	-	1	210	-	-
	Psa4g1128	477	Gene3D	-	243	477	-	-
	Psa4g1128	477	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	3	216	IPR036291	-
	Psa4g1128	477	TIGRFAM	NDP-sugDHase: nucleotide sugar dehydrogenase	4	450	IPR017476	GO:0016616
	Psa4g1128	477	PIRSF	UDPglc_GDPman_dh	3	469	IPR017476	GO:0016616
	Psa4g1128	477	Pfam	UDP-glucose/GDP-mannose dehydrogenase family, central domain	212	306	IPR014026	GO:0016616\|GO:0051287
	Psa4g1128	477	PIRSF	UDPglc_DH_euk	1	477	IPR028356	GO:0003979
	Psa4g1128	477	SUPERFAMILY	6-phosphogluconate dehydrogenase C-terminal domain-like	212	311	IPR008927	-
	Psa4g1128	477	SUPERFAMILY	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	315	465	IPR036220	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa4g1128	Psa-Chr4	81176252	81179069	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa4g1128	K00012		-	gmx:100781197	785.408

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Psa4g1128	4	81176252	81179069	Psa4g1128	4	81176252	81179069	ECH