Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1104 ATGGCTGCTGCTGCTTTTGCTCTTGCCCTACTTCTCTTCTCTTTCACCGCCATTCCTTCAAGTGCTAATTGGTGCGTTTGCAAAGATGGAAGTGACGCAGTCTTGCAGAAAACCTTGGACTATGCTTGTGGAGCTGGAGCTGACTGTAACCCTCTCCATCAAAACGCACCTTGTTTCCAACCAAACACCGTCAGAGCTCACTGCAGCTACGCTGTGAATAGCTACTTCCAGAAGAAGGGCCAAGCACCAGGAACTTGTGACTTTGCAGGAACAGCTACACCTGTTGCATCTGACCCAAGTGTTAGTGGCTGTGTCTACCCTTCAAGTGCCAGTGGTGCAGGCACTAGCACAACAACCCCATCGTCAGGCACCACTACACCCTCCATGGGAACCGGCACTACCCCTTCAACAAGCACCGGCACCGGCAGTGGTATGGGCACCGGCACAGGAACAGGCACAGGAACAGGCACAGGCACCAGCACCGGCACTGGCACGGGTACGGGTACGACTCCATACAACACATCTCCTGGAGTGTTAGGAGGTATTGGAACTGGTATGGGGCCTTCTGGAGCTGGAGGAATGAATGATGATAGTCATGGTGGGATTAGGCTTTTGGACACTAGTTTCTTATCAATCCCACTCTTTTCTATTTTCATTATGTTTTGGTAG 669 0.5157 MAAAAFALALLLFSFTAIPSSANWCVCKDGSDAVLQKTLDYACGAGADCNPLHQNAPCFQPNTVRAHCSYAVNSYFQKKGQAPGTCDFAGTATPVASDPSVSGCVYPSSASGAGTSTTTPSSGTTTPSMGTGTTPSTSTGTGSGMGTGTGTGTGTGTGTSTGTGTGTGTTPYNTSPGVLGGIGTGMGPSGAGGMNDDSHGGIRLLDTSFLSIPLFSIFIMFW* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1104 222 Pfam X8 domain 24 93 IPR012946 -
Psa4g1104 222 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 1 212 - -
Psa4g1104 222 Gene3D - 18 114 - -
Psa4g1104 222 MobiDBLite consensus disorder prediction 112 169 - -
Psa4g1104 222 SMART X8_cls 23 106 IPR012946 -
Psa4g1104 222 PANTHER BETA-1,3 GLUCANASE 1 212 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1104 Psa-Chr4 80457183 80460042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1104 24 119 Miscellaneous Gene Families AT2G16230 45.361 1.00e-23 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1104 - - gmx:100500078 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1104 4 80457183 80460042 Psa4g1104 4 80457183 80460042 ECH