Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1080 ATGGTTAGGCCACGTATCAAGTTGCGTAGTTTGTGTATTGGTCATGTTGCCACACCTCGTGTTCGAGCTTGTTCTTCTGCTTCATCTTTTGGATCTAAGTTTGCGAATAGAACTGAGTTTTCAAGCAATGGAGTTCATGATTCTGGTAGAGATAACAAAGGTGATGAAAGTGGGAATAAAGTAATGGTGGTTGTGGATTCTAGCTTTGAAGCTAAAGGGGCACTTGATTGGGCACTTTCACATACTATTCAAAGTCAAGATACTGTTGTTCTTGTTCATGTAGCTAGACCCGTTGGAGAAGGTGGTGAATCTGATGTGAAGTTTAATCTGAAGGCTTATCAACTTCTTCTAGATATGAAGAATATTTGCGAAATGAAGAAATCCGGAGTGCAAGTGAATATAGTATTGCTTGAAGGAGAGGACAAGGGTGCTGCAATAGTGCAAGAGGCAAAGCAACAAAGAATGTCTTTATTGGTTGTTGGGCAAAGAAAACGTTCTATCTTGTGGTGTTTGATGAGGAAGTGGACAAGAAAGAGAACAAAAGGTGGAGTTGCTGAATATTGTATACAGAATTCACCTTGTATGACTATTGCAGTGAGGAGGAAGAATAAGAAACTTGGAGGGTATTTGATTACTACCAAACGCCATAAAAACTTTTGGCTTTTGGCTTAG 672 0.3958 MVRPRIKLRSLCIGHVATPRVRACSSASSFGSKFANRTEFSSNGVHDSGRDNKGDESGNKVMVVVDSSFEAKGALDWALSHTIQSQDTVVLVHVARPVGEGGESDVKFNLKAYQLLLDMKNICEMKKSGVQVNIVLLEGEDKGAAIVQEAKQQRMSLLVVGQRKRSILWCLMRKWTRKRTKGGVAEYCIQNSPCMTIAVRRKNKKLGGYLITTKRHKNFWLLA* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1080 223 Pfam Universal stress protein family 60 200 IPR006016 -
Psa4g1080 223 Gene3D HUPs 58 203 IPR014729 -
Psa4g1080 223 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 223 - -
Psa4g1080 223 CDD USP_Like 60 199 - -
Psa4g1080 223 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 59 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1080 Psa-Chr4 79067995 79069462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1080 48 166 Receptor kinase-like Gene Family AT1G17540 26.829 6.71e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1080 - - gmx:100527308 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1080 4 79067995 79069462 Psa4g1080 4 79067995 79069462 ECH