Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1079 ATGCGACGACGGGCTGCCGATTATCGGCGCCCGGTTAGACGGAGGTTATCGTATTGGATCTGCCTTCTTCTCGCTTTCTCCTTCATTCTCGCTACCGTTTTGTTCATCATTCAACATAATCATCACCAAGATCCGCTTCAATATTCTTTGCTCGAGAGGAATGCGAGAGTTGAACATTTTGCCAAAGAGAGTTTGAATTTTACTGAAGAAATTTTAAGTGTAACATCATTTTCTCGGCAGTTAGCGCAACAGATGATTCTGGCCAAGGCTTATGTGGTTATTGCCAAAGAACATAATAATCTTCACCTTGCCTGGCAGCTTAGCTCAAAGATCAGAAGTTGCCAACTTTTGCTTTCAAAAGCTGCCATGACTGGGGAGCCTGTCACGCTAGAAGAAGCAGAGCCGATTATTAAAAGTCTCACTGCTCTAATTTTTAAGGCACAAGATATCCATTATGACATTGCAACTACAATAGTGACTATGAAATCTCATATTCAAGCACTTGAAGAGCGTGCCAATGCAGCAACAGTTCAAAGCGCTGTGTTTGGTCAACTAGCAGCTGAAGCACTACCCAAGAGTCTACATTGCCTGAATGTGAAACTCGTGACTGACTGGCTCAAGGTGCCATCCCTACGGGAACTCTCACACGAAAGGAAAAACTCCCCAAGGCTCACGGACAACAATCTATATCATTTCTGCTTATTTTCAGACAATGTACTGGCAACATCTGTAGTTATTAACTCAACCGTCTGCAATGCGGATCATCCGAAGCAATTGGTCTTTCACATTGTCACCAATGGAATCAATTACGGAGCAATGCAAGCATGGTTCCTTAGTAATGACTTTAAAGGAGCCACCGTAGAGGTACAGAATATTGAGGAGTTCCATTGGTTGAATGCATCTTATTCTCCAGTTGTCAAACAGCTCCACAATCCTGACTCGCGAACCTTCTACTTTGGGCTATATCATGATGTAAACGCTGAACCCAAAATTCGGAATCCTAAGTATTTATATTTATTGAATCATCTTCGGTTTTATATCCCCGAGATTTATCCACAACTTGAGAAGGTTGTTTTTCTGGATGACGATCTTGTTGTCCAAAAAGATCTGACCCCTCTTTTCTCACTGGATTTGCATGGGAATGTGAATGGTGCAGTTGAAACTTGTCTTGAAGCATTTCATCGGTATTACAAGTATCTCAACTTCTCAAGTTCAATTATAAGCTCGAGATTTGATCCACAGGCATGCGCATGGGCATTTGGTATGAACGTTTTTGACTTGGTGGCGTGGAGGAAGACTAATGTGACCGCTAGATATCATTATTGGCAGGAGCAGAATGCCGATAGGACTCTTTGGAAGTTGGGCACACTTCCTCCTGCTCTTCTGAGTTTTTATGGTTTGACAGAGCCACTTGACAGAAGATGGCATGTTTTAGGATTGGGTTATGACCTAAATATTGACAACCGCCTTATTGAAAGTGCTGCGGTTATTCACTTCAATGGGAACATGAAGCCTTGGCTGAAGGTAGCCATAGGCAGGTATAAGCCACTGTGGGACAAGTACATAAATCAAAGTCTCCCTCATCTTCAAAATTGCGTCCTGAGTTGA 1608 0.4266 MRRRAADYRRPVRRRLSYWICLLLAFSFILATVLFIIQHNHHQDPLQYSLLERNARVEHFAKESLNFTEEILSVTSFSRQLAQQMILAKAYVVIAKEHNNLHLAWQLSSKIRSCQLLLSKAAMTGEPVTLEEAEPIIKSLTALIFKAQDIHYDIATTIVTMKSHIQALEERANAATVQSAVFGQLAAEALPKSLHCLNVKLVTDWLKVPSLRELSHERKNSPRLTDNNLYHFCLFSDNVLATSVVINSTVCNADHPKQLVFHIVTNGINYGAMQAWFLSNDFKGATVEVQNIEEFHWLNASYSPVVKQLHNPDSRTFYFGLYHDVNAEPKIRNPKYLYLLNHLRFYIPEIYPQLEKVVFLDDDLVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSSSIISSRFDPQACAWAFGMNVFDLVAWRKTNVTARYHYWQEQNADRTLWKLGTLPPALLSFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKVAIGRYKPLWDKYINQSLPHLQNCVLS* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1079 535 CDD GT8_like_1 230 523 - -
Psa4g1079 535 Pfam Glycosyl transferase family 8 233 508 IPR002495 GO:0016757
Psa4g1079 535 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 533 IPR029044 -
Psa4g1079 535 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 535 IPR029993 GO:0047262
Psa4g1079 535 PANTHER HEXOSYLTRANSFERASE 3 535 - -
Psa4g1079 535 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 232 531 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1079 Psa-Chr4 79042938 79045872 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1079 1 532 Glycosyltransferase AT2G20810 55.866 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1079 K13648 - gmx:100798878 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1079 4 79042938 79045872 Psa4g1079 4 79042938 79045872 ECH