Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1078 ATGGGTTGGGCAATAGCTCTACACGGCGGCGCCGGCGACATTCCATATTCACTTCCACCGGAACGCCGCCTACCTCGCGAAGAAACCCTCCGTCACTGCCTACAAATCGGTGTCAAAGCTCTCAAATCCAACATGACTCCATTAGATGTCGTTGAACTTGTTGTTCGTGAGTTAGAGAACATTCCACACTTCAATGCTGGAAGAGGTTCTGTTCTCACCAACAAAGGGACCGTTGAAATGGAAGCTTCTATTATGGATGGTAACACTATGAAATGTGGTGCTGTTTCTGGTCTTAGCACTGTTGTTAATGCAGTTTCTTTGGCTCGATTGGTTATGGATCATACTCCTCATATTTATCTGGCATTTGATGGTGCTGAGGAATTTGCTAGACAACAAGGGGTTGAGACTTTAGATTCAAGCCATTTCATCACTCCAGAAAATATTGAAAGACTGAATCAGGCAAAAGATGCAAATAGGGTCCAGATTGATTATACTCAACCAATCCAAAAGGATACTATAAAGAATGAAACAGAAACATCATTGGCTAATGGTGATAGTCAAATTGGAACTGTTGGATGTGTAGCTGTTGACAGTAATGGGAATCTAGCTTCTGCAACATCAACTGGTGGATTGGTGAACAAAATGGCTGGTCGAATTGGTGACACGCCCGTCATAGGTGCTGGAACATATGCCAATGAATTTTGTGCAGTTTCTGCAACAGGAATAGGCGAAGCAATAATCCGCGCGACCGTAGCAAGAGATGTGGCTGCGATAATGGAATTCAAAGGCCTTTCTTTAAAGGAAGCTGCGGATTGTGTTGTACATGAGCGCACACTAAAAGGAGCTGTTGGTTTGGTTGCTGTATCTGCTTCAGGTGAAGTTGCAATGTCTTATAATACAACAGGTATGTTTAGAGCATGTGCTACTGAAGATGGGTATTCTGAAGTTGCAATTTGGCCAAATACCAAAGTTGAGTGA 978 0.4325 MGWAIALHGGAGDIPYSLPPERRLPREETLRHCLQIGVKALKSNMTPLDVVELVVRELENIPHFNAGRGSVLTNKGTVEMEASIMDGNTMKCGAVSGLSTVVNAVSLARLVMDHTPHIYLAFDGAEEFARQQGVETLDSSHFITPENIERLNQAKDANRVQIDYTQPIQKDTIKNETETSLANGDSQIGTVGCVAVDSNGNLASATSTGGLVNKMAGRIGDTPVIGAGTYANEFCAVSATGIGEAIIRATVARDVAAIMEFKGLSLKEAADCVVHERTLKGAVGLVAVSASGEVAMSYNTTGMFRACATEDGYSEVAIWPNTKVE* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1078 325 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 319 IPR029055 -
Psa4g1078 325 Pfam Asparaginase 3 319 IPR000246 GO:0016787
Psa4g1078 325 PANTHER ISOASPARTYL PEPTIDASE/L-ASPARAGINASE 1 319 - -
Psa4g1078 325 CDD Asparaginase_2 4 312 - -
Psa4g1078 325 Gene3D (Glycosyl)asparaginase 190 322 - -
Psa4g1078 325 PANTHER L-ASPARAGINASE 1 319 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1078 Psa-Chr4 79039606 79041808 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1078 5 254 Miscellaneous Gene Families AT4G00590 28.000 6.19e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1078 K13051 - gmx:100799400 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1078 4 79039606 79041808 Psa4g1078 4 79039606 79041808 ECH