Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1069 ATGGAGTTGTGGAACAAAGCTCGAAGCTTTGCGGAAGAAGCATCGAAGCGATCACAAGACCTTTCCTTGGGTGCTCACAAATTCAGCGAAATCATAGCAGAAACTACCAAGGGGATCGCGGCACAAGCTCAAGCTTCCATGCACTTGGCCGAATCTTCATTCAATAAGGATGTCGATGTTGATCTCAATCTTGAGAGCTTTGGGATCACAGATGAGTTGAGGGAGTTCATCAAAGGAATCACCGTCGCTACATTCCGAGATTTTCCTCTTCAAGATGATACAGAACTGTCTGATGTTCCTGCAGTTTCAAATATTAGGCAGGATCTAACCGAGTGGCAGGAAAAACATGCCAATCTTGTTCTTTCTAGTGTCAAGGAGATTTCAACATTGAGGTATGAGCTGTGTCCACGTGTTATGAAAGAGAGGAAGTTTTGGAGAATATATTTTATACTTATGAATAATCATATTGCACACTATGAGAATCGGTATATGGAAGATACTAAACTAAAATCATCTGAACGAGTTAAAGATCAAATAGTGATGAAACCATTAGAAGTTGAATTAACCTCTAATCAAGAAGTCAATGAAATGAAAAAAGAGACCAAAACATCAAATTCATCACGCCATCAAGACTTGGATGCATTTCTTCTGGGAGATACAGAAGACAGTGACGATGACCCAGATGACGATGATGGTGGATTTGATGATGACTTAGACAAACTGGGAGAAAGTTCGAGGAATTTCGGAGGAGAAAATGATGTGCCTGCAATGGCCAGCAGAGCTCATGCTCTCAAATGGTGGCAATGGTGGTCATACGATGGGAAAGAGGAACATGATGCTGAATATTGGGACAATGGGTCGCCTCTAATCCCAAATTGCTTTGACATTGCTTTTCAAGGCTTTGAAAATCTCCGTGACACTGTAAAAAATGGAACACCACAACAACTATACTCTTTCGTTCAAAAACCTAGTTTCCTTAATTTCCTTAGCCATCCCTCTTTATCACTTTCCACACTTTCCACAACCTGGGTCATGGGTTCCTATCCACAACCCATTTACTTTGAAGCAACACGTCAAGATTTTGACAACCCTATTGTTCTAACTGATGAAGAGATACCCCCACCGGAACCTCCTGATGAAATCTTGCTTGTGACATCAATGTATGGTGAATCAATTGTCACCATCATTAAGGCAACGCTTAATGCCAACCACTCTTCTTCCTTTGCTCGGCCACTGCCTCCTTTGGTAGCCAACACAGTCCGCTACTTCGCTCTCATCTTTGCAAGTTCGGAACTGGATTATTCTCCACACTTTATAAGCTTCGACACCGTAAGTACTATTAAGGGAAGCATAATAAAACTTCTCATGAATTGGGTCAGCTTATCTAAGCTAGGGGTTGGAGATATTGATTTTGTGTCTTGTAGCTTTACAGTTCATCAAGCTATGCTCGTGAATTGGATGAGGAATCTTGAAGTTGGTTTTCCTTCTCTTCTTGAAGATGGAATCAATTTGCTTGTTTGTATTGGTGAACATGATCTTTTCTATGACTGGCTTGTTAATTCAGGATGGGTTCATTCCATGGAATGGTCTGGCCAGAAAGAATTTATCACCTCACCTGAAGTTCCTTTCATAGTTGATGACTCAGAAACTGAAGATGAGAAGAAGAAACAGAAAGAATTGAAGGAGAAGTTTGACAATCTTTTTGTTGATTCACCATGCTTTCTTGTGACTGGTGAATATGGCTGGACTGTTAACACTGAAAGAGTCATGATAGCTCAGTCATTGAGGGACAGCAGCATGACTGGGTACATGTCTAGCAAGAAAACAGTGGAGATCAATCCAGAGAACTACATGATGGAGGAGCTGAGGAAGCATGCTGATACTGACCGCAATGACAAATCTGTGAAGGACCTTGTTCTCTTTCTCTTCGAGACTGCTCTTCTCACTTTTGGGTTCAGCCTCGATGAGCCAAACACCTTTGGAAACAGGATCCACAGAATGTTGAAGCTTGGATTGAGCATTGATGATGATGGTGGTGAAGTGTTAAAGAACTATGGAACTTTAAGTTTTTGTATTTGGCCTGATAGTGATAACTTACGAGATGATAGCATGCCAGGGAAATTTTCAAAAAGGTGGGAAAGAACTTGTGATTCTAGCCAATTATTCATTACCTACATGCACAACCTTAAGATGATTAAAGCTAAGTATTTCTTCAGGGGTGTGATTGTTCATAATCTTAAGGCTTCGATCAACATGAACTCGACTAGTGTCAATATGGGAAATGGTACTCATGCCTCACCCACTATCATTACTCTCATACATGATCGGTTATCATTACTCCCTGTATTATATGCCATACTCGAGGTCAAAACATTGCACCAATTTTATTGGGTTAAGAAGCAAAAAGTGTCGATGACAAATGATCAACATGTGCAATCACTGTTTAGAGAAGGATGGGGAACGAATGAAGGCTTGATAATATCTCTGGCTCATAGAAATGAAGCCCAGCGCAAGTCAATTTGTGAAACTTATGCTCAAACACACGAAGAAGATCTTCTTAAAGATTTAGACAAGGAACTTTCAAGTCATTTTGTGAGAGCTGTGTTGCTGTGGACCTTGGATACTGCTGAGCGTGATGCTTTTTTTAGCTAA 2652 0.4069 MELWNKARSFAEEASKRSQDLSLGAHKFSEIIAETTKGIAAQAQASMHLAESSFNKDVDVDLNLESFGITDELREFIKGITVATFRDFPLQDDTELSDVPAVSNIRQDLTEWQEKHANLVLSSVKEISTLRYELCPRVMKERKFWRIYFILMNNHIAHYENRYMEDTKLKSSERVKDQIVMKPLEVELTSNQEVNEMKKETKTSNSSRHQDLDAFLLGDTEDSDDDPDDDDGGFDDDLDKLGESSRNFGGENDVPAMASRAHALKWWQWWSYDGKEEHDAEYWDNGSPLIPNCFDIAFQGFENLRDTVKNGTPQQLYSFVQKPSFLNFLSHPSLSLSTLSTTWVMGSYPQPIYFEATRQDFDNPIVLTDEEIPPPEPPDEILLVTSMYGESIVTIIKATLNANHSSSFARPLPPLVANTVRYFALIFASSELDYSPHFISFDTVSTIKGSIIKLLMNWVSLSKLGVGDIDFVSCSFTVHQAMLVNWMRNLEVGFPSLLEDGINLLVCIGEHDLFYDWLVNSGWVHSMEWSGQKEFITSPEVPFIVDDSETEDEKKKQKELKEKFDNLFVDSPCFLVTGEYGWTVNTERVMIAQSLRDSSMTGYMSSKKTVEINPENYMMEELRKHADTDRNDKSVKDLVLFLFETALLTFGFSLDEPNTFGNRIHRMLKLGLSIDDDGGEVLKNYGTLSFCIWPDSDNLRDDSMPGKFSKRWERTCDSSQLFITYMHNLKMIKAKYFFRGVIVHNLKASINMNSTSVNMGNGTHASPTIITLIHDRLSLLPVLYAILEVKTLHQFYWVKKQKVSMTNDQHVQSLFREGWGTNEGLIISLAHRNEAQRKSICETYAQTHEEDLLKDLDKELSSHFVRAVLLWTLDTAERDAFFS* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1069 883 Pfam BSD domain 111 156 IPR005607 -
Psa4g1069 883 ProSiteProfiles BSD domain profile. 111 156 IPR005607 -
Psa4g1069 883 MobiDBLite consensus disorder prediction 192 207 - -
Psa4g1069 883 SUPERFAMILY BSD domain-like 68 160 IPR035925 -
Psa4g1069 883 SMART wurzfinal6 104 156 IPR005607 -
Psa4g1069 883 MobiDBLite consensus disorder prediction 191 210 - -
Psa4g1069 883 Gene3D Annexin 788 873 IPR037104 GO:0005509|GO:0005544
Psa4g1069 883 SUPERFAMILY Annexin 817 881 IPR037104 GO:0005509|GO:0005544
Psa4g1069 883 Pfam Annexin 817 870 IPR018502 GO:0005509|GO:0005544
Psa4g1069 883 Pfam Hsp90 protein 563 677 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Psa4g1069 883 Pfam Serine carboxypeptidase 467 547 IPR001563 GO:0004185|GO:0006508
Psa4g1069 883 Gene3D BSD domain 83 167 IPR035925 -
Psa4g1069 883 PANTHER BSD DOMAIN PROTEIN 1 44 - -
Psa4g1069 883 PANTHER BSD DOMAIN PROTEIN 56 248 - -
Psa4g1069 883 Gene3D - 550 678 IPR037196 -
Psa4g1069 883 SUPERFAMILY HSP90 C-terminal domain 566 668 IPR037196 -
Psa4g1069 883 SMART annex3 820 871 IPR018502 GO:0005509|GO:0005544
Psa4g1069 883 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 44 - -
Psa4g1069 883 PANTHER BSD DOMAIN-CONTAINING PROTEIN 56 248 - -
Psa4g1069 883 SUPERFAMILY alpha/beta-Hydrolases 442 546 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1069 Psa-Chr4 78305463 78313555 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1069 2 227 EF-hand Containing Proteins AT1G69030 40.972 1.32e-53 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1069 - - mtr:MTR_4g110020 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1069 4 78305463 78313555 Psa4g1069 4 78305463 78313555 ECH