Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1017 ATGAGGAGGGCAAGGTGTTGGTTCCCTTGTATAGATGACAATTTACAACAATGCTGCTATGACTTGGAGTTCACTGTAGCACACAATCTCGTGGCTGTCAGTACTGGAAGCTTGTTATACCAGGTCTTAACCAAGGACAATCCTCCTCGGAAAACATATGTCTATAAATTAGATGTTCCAGTTGCTGCAAGGTGGATATCATTGGCTGTTGCCCCATTTGAAGTTCTTCCCGATCACCAATTTGGCCTCATATCGCATCTGTGTTTGGCACCTAATCTGGCAAAAATGCGGCATACAGTGGAGTTCTTCCATAATGCCTTCAGCTGCTATAAGGATTATCTTTCTGTAGACTTCCCATTTGACTCGTACAAGCAAGTTTTTGTAGAGCCTGAGATGGCAGTTTCATCATTGAGTTTAGGAGCCTCTATGAGTGTATTTAGTTCTCAAATTTTGTATGATGAGAAGGTTATTGACCAGACTATTTATACAAGGGTAAAACTTGCTTATGCCCTTGCGAGACAGTGGTTTGGTGTGTATATCACTCCTGAGTCACCAAATGATGAGTGGCTCTTGGAAGGACTCGCCGGTTTCTTGGCAGATTTTTTTATTAAGAAGCATTTGGGTAATAATGAGGCACGGTACCAGAGATATAAGGCAAATTGTTCTGTTTGCAAAGTTGATAATGGTGGAACAACAGTTTTGAGCTGTTCAGCTTCCTGTAAGGATTTATATGGAACACAATGCATTGGGTTGTACGGAAAAATACGAGCATGGAAGTCTGTGGCAGTTGTTCAGATGCTGGAAAAGCAAATGGGTCCTGAATCTTTCCGTAGAATTTTACAAACTATAGTTACTCGGGCTCAAGATAAAGTACGCTCAGTGAAAACACTTAGTACTAAGGAGTTTCGACATTTTGCTAACAAGGTTGGAAATCTAGAACGTCCTTTTCTTAAAGATTTCTTCCCCCGTTGGGTCGGTTCTTGTGGATGTCCTAATTTAAGGATGGGGTTATCCTATAATAAACGAAAGAATGTGGTTGAACTGGCTGTGTTGAGAGGATGCACAGCATTGCAGACTTCGAGTACAGCCGTTCTTGATATCAATCCAGATACTGAAAATCGAGATGCAGATTCTGGATGGCCTGGTATGATGAGTATCAGGGTGTATGAACTTGATGGTATGTATGACCATCCTATTCTACCAATGGCAGGAGAAGCATGGCAGCTTTTGGAAATTCAATGCCACTCGAGGCTTGCTGCTAGACGGTTTCAAAAACCAAAGAAAGGTTTAAAACATGACGGCTCTGATGACAATGGTGACATACCTTCAATGGATATACGCTCCAGTACAGAGTCCCCTTTATTATGGATCAGAGCAGATCCTGACATGGAGTACCTTGCTGAGGTTCATTTTAATCAACCAGTTCAGATGTGGATTAACCAATTAGAGAAGGATAAAGATGTTATTGCTCAGGCCCAAGCAATTGCAGCCCTTGAGGCATCACCCCAGCTATCATTTTCTGTTGTAAATGCCCTGAACAGTTTTCTTACCGACTCCAAGGCTTTCTGGAGAGTAAGAATTGAAGCAGCATTTGCATTGGCGAATTCGGCATCCGAGGAAACTGATTTTTCTGGTCTATTCCATTTGGTGAAATTTTACAAGAGTCGAAGATTTGATTCTGACATTGGACTCCCAAAGCCAAATGATTTTCATGATTTTGCCGAGTATTTTGTTCTTGAGGCCATTCCACATGCCGTAGCTATGATTAGGGCCGCTGACAAGAAAAGTCCTAGAGAGGCTATCGAATTTGTTTTACAGCTATTAAAGTATAATGACAACACTGGCAACCCTTACTCAGATGTCTTCTGGCTTGCTGCACTGGTCCAATCAATTGGCGAGTTTGAGTTTGGGCAACAGAGTATTCTTCTATTGTCATCACTCCTCAAGCGCATTGACAGGCTTTTACAATTTGATAGTCTCATGCCAAGCTACAACGGAATCTTGACTGTCAGTTGTATCCGGACATTGGCCCAGATTGCGATAAAACTTTCAGGATTCATTCCTCTTGATCGCATATATGAACTTTTAAAGCCTTTTCGAGACCTAAAGGCGATTTGGCAAGTTCGAATCGAAGCAAGCAGAGCACTCCTTGATCTCGAATTCCACTTCAAGGGCATTGATGCCGCACTTCTTTTATTTACCAAATATGTTGAGGAGGAGCCTTCCTTGAGAGGCAAGTTAAAATTGGCCACCCATGTTATGAGGCTATGCCAGATGAGAGATAGTTTGATTTCAAACGATGAAATTACAAGCCGAACACTTGTCTCTTTGCTCAGTTTACTGGAAGGGCGAATGTCATTTAATAATGTCTTTCTCCGTCACTACTTGTTCTGCATATTACAAATACTGGCAAAAAGACCCCCAACTCTTCATGGAATTCCGAGAGAAAGTAGAACGTTGCATATGAGTCTTACCGAAGCTGGTAACTATCAGAGGAACCTATTTGTCCTTGATTCCGAAAATAAACCTTTGGAGTTGCCAAATTCCACCCAAAATCTTACACCAGATTTGATCGTAACTGAGGGTTTTAGGGATGTACTTGATGAAGCTCCCCAAAACCAAGTTTTTGAAGTTTCCAAGGACCAAACCTTTGAAGCTCCCAAAGAAGTACAGGTTGAAGCTTTAAAGGAAATGCCCCTCGAGGCTCCCAAAGAGGACTTAACAGGATTCCCCCCCGAAGCACCAATTGAAGCTCCGAATGAAATTTACAAGGAAGCAGATACTGTATCTAATAGCCATGAAAGAAGAAGGCTAATCAAAATCAAGGTTAAACAATCTTCTGCCACCAGTAGGGCTGATACTGATAATCAAATGGTTGAGCGCTCTTTAGGTGGTCGTAATGATATTGATCATGGAGCTAGCAGTTCAGTTTCAGTTTCAGTAGATGCACCTCAGAGGAATTTTGCAGAGACTGTTAGCATCGGTAATCACAATGTTGAAGAAGTTAATTCTTGGCATGATCCCGGTTCCCGTATGACTGCCAGCATCGGCAGTGCAAAAATTTTGGGTGATGAATTGGTCAAAGAACTCCAATGCACTGCCGATTCAAGTATAGTTTACTCACAACCTAGGCTAGAAGATCCGTCACCATCTAGTCTTATCCAGGATAACAATATAGATGCTGATGCGCGGCGATTTGCCAGCCTTCAAACACTCTCAGTTGCTAGACTCGATCATGATGGAGAATCATTTGGCAAAGAAATTTCTGCTCGCAGGAAAGAAAAACACCGAGATAAGGATAAGAAACGGAAAAGGGAAAGTCACAAAGGACAGCGTGATGGCCCAGAATACTTGGAGCGAAAGAGATTAAAGAAAGAGAAAAAACGAAAGGAAAAAGAATTGGCGAAATTGCAAAGTGATGAAGCAAAAAGATCCTCCATAGACTTGTCATGTAAGAAAGAGCAGCCTGTAGTGGATGGAGTAAAACAGCTTAAATCTGTTGAGCCCAGTGGTTATAATTCTGTACCAGACATTAGAACTATTGATACAAAGCCGAGGGCATCCGAAGGCACATCTGGTGCGCCCAAAATTCGAATTAAAATTAAAAATAGAATGCTTAACAAGTCATAG 3630 0.4179 MRRARCWFPCIDDNLQQCCYDLEFTVAHNLVAVSTGSLLYQVLTKDNPPRKTYVYKLDVPVAARWISLAVAPFEVLPDHQFGLISHLCLAPNLAKMRHTVEFFHNAFSCYKDYLSVDFPFDSYKQVFVEPEMAVSSLSLGASMSVFSSQILYDEKVIDQTIYTRVKLAYALARQWFGVYITPESPNDEWLLEGLAGFLADFFIKKHLGNNEARYQRYKANCSVCKVDNGGTTVLSCSASCKDLYGTQCIGLYGKIRAWKSVAVVQMLEKQMGPESFRRILQTIVTRAQDKVRSVKTLSTKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPNLRMGLSYNKRKNVVELAVLRGCTALQTSSTAVLDINPDTENRDADSGWPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSRLAARRFQKPKKGLKHDGSDDNGDIPSMDIRSSTESPLLWIRADPDMEYLAEVHFNQPVQMWINQLEKDKDVIAQAQAIAALEASPQLSFSVVNALNSFLTDSKAFWRVRIEAAFALANSASEETDFSGLFHLVKFYKSRRFDSDIGLPKPNDFHDFAEYFVLEAIPHAVAMIRAADKKSPREAIEFVLQLLKYNDNTGNPYSDVFWLAALVQSIGEFEFGQQSILLLSSLLKRIDRLLQFDSLMPSYNGILTVSCIRTLAQIAIKLSGFIPLDRIYELLKPFRDLKAIWQVRIEASRALLDLEFHFKGIDAALLLFTKYVEEEPSLRGKLKLATHVMRLCQMRDSLISNDEITSRTLVSLLSLLEGRMSFNNVFLRHYLFCILQILAKRPPTLHGIPRESRTLHMSLTEAGNYQRNLFVLDSENKPLELPNSTQNLTPDLIVTEGFRDVLDEAPQNQVFEVSKDQTFEAPKEVQVEALKEMPLEAPKEDLTGFPPEAPIEAPNEIYKEADTVSNSHERRRLIKIKVKQSSATSRADTDNQMVERSLGGRNDIDHGASSSVSVSVDAPQRNFAETVSIGNHNVEEVNSWHDPGSRMTASIGSAKILGDELVKELQCTADSSIVYSQPRLEDPSPSSLIQDNNIDADARRFASLQTLSVARLDHDGESFGKEISARRKEKHRDKDKKRKRESHKGQRDGPEYLERKRLKKEKKRKEKELAKLQSDEAKRSSIDLSCKKEQPVVDGVKQLKSVEPSGYNSVPDIRTIDTKPRASEGTSGAPKIRIKIKNRMLNKS* 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1017 1209 Gene3D Neutral Protease Domain 2 82 329 IPR027268 -
Psa4g1017 1209 SUPERFAMILY ARM repeat 272 782 IPR016024 -
Psa4g1017 1209 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 2 1141 IPR037813 GO:0005669
Psa4g1017 1209 Coils Coil 1118 1145 - -
Psa4g1017 1209 MobiDBLite consensus disorder prediction 1085 1148 - -
Psa4g1017 1209 MobiDBLite consensus disorder prediction 1107 1122 - -
Psa4g1017 1209 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 4 71 IPR042097 -
Psa4g1017 1209 Gene3D tricorn interacting facor f3 domain 1 70 IPR042097 -
Psa4g1017 1209 MobiDBLite consensus disorder prediction 425 444 - -
Psa4g1017 1209 MobiDBLite consensus disorder prediction 1130 1148 - -
Psa4g1017 1209 Pfam Peptidase family M1 domain 100 297 IPR014782 GO:0008237|GO:0008270
Psa4g1017 1209 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 87 333 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1017 K03128 - gmx:100792795 1996.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1017 4 75927093 75942186 Psa4g1017 4 75927093 75942186 ECH