Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0562 ATGTCCAGGCTTGCGATTGATTTCACTATGAAGAGGAAAAGAAGTATTGTGTCACGCAAACCTAGGGCTAATTGTGATGCAATATTTAAGAGATACTTTGGGTGGATACCACATGCTGAGAATGAGAGCGTGAGAGATACAGTGGTTGTTTCTGATGGATTAGGAACTAATAACAAGTTGAAGAAGCTAAAACTCAAGTTTGGGGGTGTTACTCATACTATTCATACCAAGTCAAAGGCAGGAACATGCCTTCCTTCTGGTTCTGATGGTCGAAACCCTAAGGACAATGCAAATACTAACCATCCCCGTTCTTCTGATAAGAGAGATGCTGGGGAAAAATCAGTTAAGCTCTCAAGAACTGAATCTTGTTTTGCAGCTGAGAATCATTCACATAAAAGAAAGACAAGTGGAAAACATGCCCGTAAGAGTAAGCAAGTTACTGAGAGATGTGCCTTGGGCGTGGGATTTAGCGACGAGGAAGATGAAGATGCAGAACTTCAATTTCTTGAAAAAATCAATTCATCAAAAAGATCAGCTAGTCGTTATAAAGATATTCAAGGAGGCACAACAATGCGTGGCATTTGTAAAGATGCATTAGGGAAGAAATATGGGGATCAGGACTATGTGGAAGAAGCCCCAACATCAAGTGATGAATCAATATTAGAAGGGAATAAGCCAAAGAGGGAGTCTGTTGATTTGATTGTACCAAGAAAGCAATCCACCCGCAGTAATCGTAATTGTTCAGTTGACTCTTTCAATGATATGTTATCTGGGCCAGTTGCAAGCATTATTGACATCTCAGATAAAAAGGCCAAATTGTCAGAGGAGCAGCTAATCAAGAAAGCTGAGGCTGCAAAGAGACGAAAAATTCAAGCAGAGAAGGCAGCTAAGGAGGCTGAGGAGGCAGCCATTAAGAAGATACTTGGTCAAGATTCTGCTAAGAAGAAGAAAGAGGAAAAGATGAACAAGCGCAGGGATGAATTAGCAAAGGAAAAATCTAGCAAACCCTTTCATCTAGCATCTAAAACTGTTCGATGGACTATGGGTCCCAATGGAACTGTAGTAACTTTTTCTGAAGACATGGGTCTACCAAGTATCTTCCAAACAATACCGAACAGTTATCCTCCCCCGAGGGAAAAGTGTGCGGGTCCAAACTGCACTAATGCTTACAAGTATCGGGATTCCAAGTCAAAGCTTCCTCTTTGCAGTCTTGGTTGTTACAAGGCCATTCATGAAAAAATATCTCCTGTGGTTGCTTGTTAG 1263 0.4117 MSRLAIDFTMKRKRSIVSRKPRANCDAIFKRYFGWIPHAENESVRDTVVVSDGLGTNNKLKKLKLKFGGVTHTIHTKSKAGTCLPSGSDGRNPKDNANTNHPRSSDKRDAGEKSVKLSRTESCFAAENHSHKRKTSGKHARKSKQVTERCALGVGFSDEEDEDAELQFLEKINSSKRSASRYKDIQGGTTMRGICKDALGKKYGDQDYVEEAPTSSDESILEGNKPKRESVDLIVPRKQSTRSNRNCSVDSFNDMLSGPVASIIDISDKKAKLSEEQLIKKAEAAKRRKIQAEKAAKEAEEAAIKKILGQDSAKKKKEEKMNKRRDELAKEKSSKPFHLASKTVRWTMGPNGTVVTFSEDMGLPSIFQTIPNSYPPPREKCAGPNCTNAYKYRDSKSKLPLCSLGCYKAIHEKISPVVAC* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0562 420 MobiDBLite consensus disorder prediction 78 99 - -
Psa4g0562 420 MobiDBLite consensus disorder prediction 206 230 - -
Psa4g0562 420 PANTHER PAPA-1-LIKE FAMILY PROTEIN / ZINC FINGER (HIT TYPE) FAMILY PROTEIN 7 420 - -
Psa4g0562 420 PANTHER INO80 COMPLEX SUBUNIT B 7 420 IPR029523 GO:0006338|GO:0031011
Psa4g0562 420 Coils Coil 275 302 - -
Psa4g0562 420 MobiDBLite consensus disorder prediction 100 116 - -
Psa4g0562 420 MobiDBLite consensus disorder prediction 312 334 - -
Psa4g0562 420 Pfam HIT zinc finger 377 408 IPR007529 -
Psa4g0562 420 SMART PAPA_1_2 276 361 IPR006880 GO:0031011
Psa4g0562 420 MobiDBLite consensus disorder prediction 78 146 - -
Psa4g0562 420 Pfam PAPA-1-like conserved region 276 361 IPR006880 GO:0031011
Psa4g0562 420 Coils Coil 314 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0562 Psa-Chr4 34571299 34575922 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0562 - - cam:101504308 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0562 4 34571299 34575922 Psa4g0562 4 34571299 34575922 ECH