Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g0397 ATGCATAGTAGAGAGAAACCGTTGTTCCCGCAGAGAAGAAGAACACCTTCTTTTTCATCCATTCTTCTCGACACCATTGATCATTCCATCGACGAAGATGAAAACCAGAAACCATGTCCCTACAAAAATGGCATTGAAAAAAAGAGTATGAATCTTCGTCAAGCTGTGATGATTGAAGATTGGATGGAGAAGAATTATACTTCAACAAGCTCTTCAGAATGTAGCTCTGCTGGAATCTTTTCATCCTCAGAAACAGATTCATCTTACAATAAACAAAGATCGAAAACTCATAAGCATATGAACCTGATTCATCATATCAACTCAGAGAAACAACAACAACAACAACAACAGAACAAGAAGAAACAACAAGGTTGGGAAGATGGTTTTACGAGAACGAAACTGAGAGCTTTGAAAATCTACGGTGAGTTGAATCAGAAAGTGAAACAACCCATTTCACCCGGGAGTAAAATAGCGACATTTCTTAGCTCAATTTTCAATTCTCACAATGTGAAGAAAGCGAAAATGTGTTACGTTGGTGCTGTTGAAGATGTTAGTTTTGATCATAAATCTAAGTCGCCGTGTTTTTCTTCTTCGGTTTCTTCGTTTTCTAGAAGGTCTTGCATGAGTAAAACGCCTTCGAAATCGAACAATGGTGTTAAAAGAACAGTTAGATTCTACCCTGTTAGCGTAATCCTAGGTGAAGATTCTGAACAACAACAACAACAAAAACCTAGTACTGTTCGAAAGAGTACGAGGAATTCTGTTAAGGAGGTGAAGAAAATTAACAATGTTGTTGTCGGGGATAAAGAAAAAGGAGGTGATAAAAGTGGATTTGATTTTAGAAGGTTTTGCGATAATGGTGAAGACGACTATGAGGATGATGATGATGCTGGGAGCTATTCGAGTTCGGATTTGTTTGAGCTTGATCATCTTATCGGAGATGGAAGGTTTCGAGAAGAGCTTCCTGTTTATGAAACTACCAATTTAGAAACCAATAAGGCCATTGCTAATGGTTTGTGTTTGTAG 1026 0.3782 MHSREKPLFPQRRRTPSFSSILLDTIDHSIDEDENQKPCPYKNGIEKKSMNLRQAVMIEDWMEKNYTSTSSSECSSAGIFSSSETDSSYNKQRSKTHKHMNLIHHINSEKQQQQQQQNKKKQQGWEDGFTRTKLRALKIYGELNQKVKQPISPGSKIATFLSSIFNSHNVKKAKMCYVGAVEDVSFDHKSKSPCFSSSVSSFSRRSCMSKTPSKSNNGVKRTVRFYPVSVILGEDSEQQQQQKPSTVRKSTRNSVKEVKKINNVVVGDKEKGGDKSGFDFRRFCDNGEDDYEDDDDAGSYSSSDLFELDHLIGDGRFREELPVYETTNLETNKAIANGLCL* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g0397 341 MobiDBLite consensus disorder prediction 108 127 - -
Psa4g0397 341 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 4 341 IPR039621 GO:0009734
Psa4g0397 341 MobiDBLite consensus disorder prediction 234 249 - -
Psa4g0397 341 MobiDBLite consensus disorder prediction 108 123 - -
Psa4g0397 341 MobiDBLite consensus disorder prediction 234 254 - -
Psa4g0397 341 PANTHER PROTEIN BIG GRAIN 1-LIKE A 4 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g0397 Psa-Chr4 24517090 24518883 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g0397 - - mtr:MTR_4g125620 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g0397 4 24517090 24518883 Psa4g4231 4 374295841 374297037 ECH
Psa4g0397 4 24517090 24518883 Psa6g0514 6 16962943 16964902 ECH
Psa4g0397 4 24517090 24518883 Psa4g0397 4 24517090 24518883 ECH