Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g4056 ATGCAATCTTTGGTTTCAAAACAATCCAACAAAAAGAAACATCCAAACACACCTAATTCCAACAACCCATATTATCTCTTCGTCATAGCAATCATAGCCGCAGCCTTCATCCTCTTCGTATTCTATTCCCGACAAACAGATCCCCGACACATATGCTCCACCGTCGGACCCATCACGCCGGCCCAAACCATCATCGCTGACGAATTCGCAACATCATCAATCCCCTTAGTCACAATCTTCCACTACGCGACGGCGCGTGACGTTCCCCAACAGTCCAAAAACGAGATCAGAAGACCATTCGACGTACTACAATCCTTAGGGCCATGCAACTTCCTCGTATTTGGAATAGGTCACGACGCGCTTATGTGGGATTCGTTTAACCCACGTGGCACCACGTTATTCCTCGAAGAAGATCCAAAGTGGACAATCTCTTCCCTCAGGCGTTTTCCTATTTTACGCGCCTACACGGTGCGTTACAACACGCGCCTCATAGAAGCCAACGCATTATTATCATCCTACAAGAAGAATTGCGGGGTGCTCGACGGAGACGATCACCCCCTCAAGGATGATCGTAAATGTAGGCTAGCATTGGGTGATTTTCCGAATGAGGTGTATGATCGTGATTGGGATGTGATTATGATTGATGCGCCGAGGGGGTATTTTCCGTCGGCTCCAGGGAGGATGGCGGTGATATATTCTGCAGCTGTGATGGCGCGTGGAAGGAAACAAGCGGGTGTGACGCACGTGTTTCTTCATGATGTAGATAGAGTTGTTGAGAGATTGTATGCTAAGGAGTTTTTGTGCATGAAATATAGAGTTGGTGGTGTAAAGAAACTTTGGCACTTTGTTATTCCACCTGCTCTTAATGTTACAGATACTGCACATGGATTTTGCTAA 897 0.4682 MQSLVSKQSNKKKHPNTPNSNNPYYLFVIAIIAAAFILFVFYSRQTDPRHICSTVGPITPAQTIIADEFATSSIPLVTIFHYATARDVPQQSKNEIRRPFDVLQSLGPCNFLVFGIGHDALMWDSFNPRGTTLFLEEDPKWTISSLRRFPILRAYTVRYNTRLIEANALLSSYKKNCGVLDGDDHPLKDDRKCRLALGDFPNEVYDRDWDVIMIDAPRGYFPSAPGRMAVIYSAAVMARGRKQAGVTHVFLHDVDRVVERLYAKEFLCMKYRVGGVKKLWHFVIPPALNVTDTAHGFC* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g4056 298 Pfam Polysaccharide biosynthesis 95 282 IPR021148 -
Psa3g4056 298 PANTHER POLYSACCHARIDE BIOSYNTHESIS PROTEIN 1 298 - -
Psa3g4056 298 PANTHER OS11G0490100 PROTEIN 1 298 IPR006514 GO:0045492
Psa3g4056 298 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 78 289 IPR006514 GO:0045492
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g4056 Psa-Chr3 379422907 379424431 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g4056 - - mtr:MTR_7g029100 451.44