Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3858 ATGGGAACAAATGAATGGCATGTTGAAAGAAGATCTACCTCTGATACTGATTCTCCTTTAGCACCAAGAAGAGACGTGCTTGAAACTGGAACACTTTCAATTGTTGTTCTTGGTGCTTCTGGTGATCTTGCTAAGAAGAAGACTTTTCCTGCACTTTTTCACCTGTATAAACAGGATTTGTTGCCATCCGATGAAGTTCATATTTTTGGTTATGCAAGGTCAAAGATCTCTACCGATGAATTGAGAAACAAATTGCAAAGCTATCTTATTCCAAAGAAAGATGCTTCCCCTAAAGACTTACATGATGTATCGGATTTTTTACAATTGGTTAAATATATAAGTGGCGGTTACGATTCTGAGGAAGGCTTTCGCTTGTTGGATATAGAGATTTCTGAGCATGAGTATTTGAAAAATAGTAAAGAAGGTTCATCTCGAAGGCTTTTCTATCTTGCACTTCCTCCTTCCGTGTATCCGTCTGTTTGCAAGATGATCAAGACTTATTGCATGAATAAATCTGATCTTGGTGGATGGACACGTGTTGTTGTTGAGAAACCCTTTGGTAGGGATCTAGAATCTGCAGAAGAACTCAGTAATCAGATCGGAGAGTTGTTTGAAGAACCACAAATTTATCGTATTGATCACTACTTGGGAAAGGAACTAGTGCAGAACATGTTAGTACTTCGTTTTGCAAATAGGTTCTTTTTGCCTCTTTGGAACCGCGACAACATTGACAATGTGCAGATAGTATTTCGGGAGGATTTCGGAACTGAAGGCCGTGGTGGATATTTTGATCAATACGGAATTATTCGAGATATTATTCAAAATCATCTGTTGCAGGTTCTTTGCCTGATTGCTATGGAAAAACCTGTTTCTCTCAAGCCTGAGCACATTCGGGATGAGAAAGTGAAGGTTCTCCAGTCAGTACTCCCTATTAGAGATGATGAGGTTGTCCTTGGACAATACGAAGGCTATAAAGATGACCCAACTGTCCCTGACGAGTCAAATACTCCGACTTTTGCAACTGCTATTCTGCGGATACACAATGAAAGATGGGAAGGTGTTCCTTTCATTATGAAAGCAGGGAAGGCTCTAAATTCTAGAAAGGCAGAGATACGGGTTCAATTCAAGGATGTACCTGGTGATATTTTTAGGAGTAAAACGCAAGGGAGGAATGAGTTTGTTATCCGCCTACAACCTTCTGAAGCTATTTACATGAAGTTTACGGTTAAACAACCTGGACTGGAGATGTCCGCGGTTCAAAGTGAACTAGACTTGTCATATGGGCAACGATATCAAGGGATAACCATTCCAGAAGCTTACGAGCGTCTTATTCTTGACACAATTAGAGGTGATCAGCAACATTTCGTTCGCAGAGATGAATTAAAGGCATCGTGGGAGATTTTCACGCCGCTTTTACACAAAATTGATAGAGGGGAGTTGAAGCCAATTCCTTACAAGCCAGGAAGTAGAGGTCCCGCAGAAGCTGATGAGTTATTAGAAAAAGCTGGTTATGTTCAAACACATGGTTATATATGGATTCCTCCTACCTTATAG 1554 0.4035 MGTNEWHVERRSTSDTDSPLAPRRDVLETGTLSIVVLGASGDLAKKKTFPALFHLYKQDLLPSDEVHIFGYARSKISTDELRNKLQSYLIPKKDASPKDLHDVSDFLQLVKYISGGYDSEEGFRLLDIEISEHEYLKNSKEGSSRRLFYLALPPSVYPSVCKMIKTYCMNKSDLGGWTRVVVEKPFGRDLESAEELSNQIGELFEEPQIYRIDHYLGKELVQNMLVLRFANRFFLPLWNRDNIDNVQIVFREDFGTEGRGGYFDQYGIIRDIIQNHLLQVLCLIAMEKPVSLKPEHIRDEKVKVLQSVLPIRDDEVVLGQYEGYKDDPTVPDESNTPTFATAILRIHNERWEGVPFIMKAGKALNSRKAEIRVQFKDVPGDIFRSKTQGRNEFVIRLQPSEAIYMKFTVKQPGLEMSAVQSELDLSYGQRYQGITIPEAYERLILDTIRGDQQHFVRRDELKASWEIFTPLLHKIDRGELKPIPYKPGSRGPAEADELLEKAGYVQTHGYIWIPPTL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3858 517 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 31 514 IPR001282 GO:0006006|GO:0016614|GO:0050661
Psa3g3858 517 Gene3D - 29 211 - -
Psa3g3858 517 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 225 504 IPR022675 GO:0004345|GO:0006006|GO:0050661
Psa3g3858 517 MobiDBLite consensus disorder prediction 8 22 - -
Psa3g3858 517 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 35 223 IPR022674 GO:0006006|GO:0016614|GO:0050661
Psa3g3858 517 PRINTS Glucose-6-phosphate dehydrogenase signature 179 192 IPR001282 GO:0006006|GO:0016614|GO:0050661
Psa3g3858 517 PRINTS Glucose-6-phosphate dehydrogenase signature 203 231 IPR001282 GO:0006006|GO:0016614|GO:0050661
Psa3g3858 517 PRINTS Glucose-6-phosphate dehydrogenase signature 255 272 IPR001282 GO:0006006|GO:0016614|GO:0050661
Psa3g3858 517 PRINTS Glucose-6-phosphate dehydrogenase signature 273 289 IPR001282 GO:0006006|GO:0016614|GO:0050661
Psa3g3858 517 PRINTS Glucose-6-phosphate dehydrogenase signature 350 376 IPR001282 GO:0006006|GO:0016614|GO:0050661
Psa3g3858 517 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 213 219 IPR019796 GO:0004345|GO:0006006
Psa3g3858 517 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 213 510 - -
Psa3g3858 517 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 33 504 IPR001282 GO:0006006|GO:0016614|GO:0050661
Psa3g3858 517 PIRSF G6PD 9 509 IPR001282 GO:0006006|GO:0016614|GO:0050661
Psa3g3858 517 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 25 226 IPR036291 -
Psa3g3858 517 MobiDBLite consensus disorder prediction 1 22 - -
Psa3g3858 517 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 1 516 IPR001282 GO:0006006|GO:0016614|GO:0050661
Psa3g3858 517 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 1 516 - -
Psa3g3858 517 Gene3D Dihydrodipicolinate Reductase; domain 2 212 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3858 Psa-Chr3 352684797 352689575 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3858 K00036 - gmx:100817852 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3858 3 352684797 352689575 Psa3g3858 3 352684797 352689575 ECH