Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3774 ATGGGTAGCACATTCAATCCGCAGATTTTAGTGGAAAAACTAGCCAAGCTGAATGGCTCGCAGACAAGCATAGAGACTTTGTCACATTGGTGCATATTTCATATGAACAAAGCCAAACAAGTTGTCGAAACGTGGGCTAAACAGTTCCATTGCTCTCCTCATGAAAAGAAATTGACATTTCTGTTTCTTGCAAATGATATTTTACAAAACAGCAGGAGAAAGGGATCTGAATTTGTTGGTGAATTTTGGAAGGTTCTTCCAGATTGTCTTCGAGATGTCACTCAAAATGGAGACGAGTATGCAAGAAATCAAGCATTTCGACTGATTGGTATATGGGAAGAAAGAAAAGTTTTTGGTTCTCGTGGTCAAATTCTAAAGGAAGAATTTATTGGGAAACATGATTTGAAACCTTTGAATGCCAAACCTACGAATGTGAAACCTATGAACGTGAAACTGAGGCCGTCTGCTGGGAATGCATTGGATAAAATAGTTTCAGGCTATCATCATATTTATGCAGGGCAGACTGATGAAGATGTTGTATTAAGCAAATGCAGGAATGCCATTAGCTCTCTTGAGAAAGCAGATAAGGAAATAGTTCATGGTAGTAATTCAGGGAAATTTCATGGACCTGCAGTTGTGAATGAGCTCCAGGGGCATAATGCAATACTAAAGGACTGTATTGAGCAGTTAACAACACTAGAATCATCAAGAGCTGGCCTTGTGTCTCATCTGAGAGAGGCTCTTCAGGATCAGGAATTCAAGCTGGGTCAAGTTCGTAGCCAGATCCAGGCTGCAAGTGCTCAGTGGGAACATGCGAACAATACCTGCCAACAATTACTGAACGGCAACAATATTCAGTCAGTAGTTGAACAGAGCTCAAAGGAAATTCAGACCTCCATGACACCTGCAAGTTTTATTTCTGGCGACAGGGAGCTATCAGCCCCATTAATGTATGCACCACAAATTCCGTTTCATCAAAATTCTGGACACGGTGAGGAAGATCCACGCAAGTCTGCAGCCGCCGCAGTGGCAGCAAAGCTGACTGCATCCACATCCTCCGCCCAGATGCTGTCTTATGTGCTATCCTCTTTAGCATCAGAAGGTGTCATAGGCAATCCGATGACAGAGTCTTCTGCTGATTATCACTCCGAGAAGAGGACTAAGCTTGAGAATGATGGGCCATCGTATGTGCCATCTCATGTGCCATCTCAGAATCCTCAACCACCACTTCCTCCCTTTTCGCTTTCTGAACCTACCCAACACTATGCATCTTCATCCAACCAGCAATCTATTCCAAATGAGCCACCACCCCCACCCTCATCATCACCTCCCCCACTACCCCCACCGCCACCAATGCCTCAACAATACCCTGTGCCGCAGTTCATGCAGACTGTTGGACCTGTTAACAATATGGCATATAGCTATGGCGTGATTCAACAGCCGTCAATGGCAGCCTATCCTGCAGTTGGGATTTCCATGAACAATGTATCACCTTATACACCTCCAATGAACCCATATCAGGGTTTTCAGGGTTCGGATGGAAACTATTACAACCCGTCTTCCTCAATGCCTATGGTCCCCATCTCGCGCCAATAA 1596 0.4449 MGSTFNPQILVEKLAKLNGSQTSIETLSHWCIFHMNKAKQVVETWAKQFHCSPHEKKLTFLFLANDILQNSRRKGSEFVGEFWKVLPDCLRDVTQNGDEYARNQAFRLIGIWEERKVFGSRGQILKEEFIGKHDLKPLNAKPTNVKPMNVKLRPSAGNALDKIVSGYHHIYAGQTDEDVVLSKCRNAISSLEKADKEIVHGSNSGKFHGPAVVNELQGHNAILKDCIEQLTTLESSRAGLVSHLREALQDQEFKLGQVRSQIQAASAQWEHANNTCQQLLNGNNIQSVVEQSSKEIQTSMTPASFISGDRELSAPLMYAPQIPFHQNSGHGEEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNPMTESSADYHSEKRTKLENDGPSYVPSHVPSQNPQPPLPPFSLSEPTQHYASSSNQQSIPNEPPPPPSSSPPPLPPPPPMPQQYPVPQFMQTVGPVNNMAYSYGVIQQPSMAAYPAVGISMNNVSPYTPPMNPYQGFQGSDGNYYNPSSSMPMVPISRQ* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3774 531 Gene3D - 2 129 IPR008942 -
Psa3g3774 531 MobiDBLite consensus disorder prediction 401 415 - -
Psa3g3774 531 Pfam CID domain 9 120 IPR006569 -
Psa3g3774 531 SMART 558neu5 9 130 IPR006569 -
Psa3g3774 531 MobiDBLite consensus disorder prediction 376 447 - -
Psa3g3774 531 MobiDBLite consensus disorder prediction 431 447 - -
Psa3g3774 531 PANTHER OS01G0925000 PROTEIN 1 531 - -
Psa3g3774 531 SUPERFAMILY ENTH/VHS domain 12 117 IPR008942 -
Psa3g3774 531 ProSiteProfiles CID domain profile. 2 141 IPR006569 -
Psa3g3774 531 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 531 - -
Psa3g3774 531 CDD CID_RPRD_like 7 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3774 Psa-Chr3 334311721 334323870 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3774 K15559 - gmx:100806108 721.85