Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3752 ATGGCTTTCCGACTCATCTCACCACCGCCGTCTTTCCATCGCTTCACTTGTCACGCCACCACCGTTCCTCCCCCTCCTCAAATCTCAACCGCAACCCCTATTTCTTCAACTCCACAGCCCCCGCCACTAACATGCGCACTTCATTGCCCCCATTTCCAATCGTGTTCGGGGTGCACGCACGAGCTTAACCTACACCGCCCTGTGATTTTGGAGGACGCTACCAATTTCTTTCGGAAATATGGCGTCACGGACTTCACATTCGATACTTGCAATTTGGTCTTAATCCTTACCTACGGTAACCCTTTCCATCCTTCTTCCATGGCCGACTCGGATTCAAACTCCAATGAGGTTACCTCGTCTTCCATTCTTGCTGAATTGACGATTAAAATGACGGAAGTTCTGAACCGTGCGTCAACCTCGTCACAAATTGGCTCTGACCATACGGTGGCACCGATTGGCATCAAGTTAGATGGCAACAACTATCCCCTTTGGTCCCAGGTGGTCGAGATGTATATCTCGGGCAAAGACAAACTAGGATATATCAATGGAGATCTCCCGCAACCCCCTCAAACAGATCCTACGTTTCGACGTTGGTGGACTGACAACGCGATTGTTAAGGGATGGATAATCAACTCAATGGACTCTTCTCTAATCAGCAACTTTATTCGCTTCTCCACTGCCAAGCTGGTGTGGGATGCAATTGCGACCACGTACTTTGATGGCAGTGACACCTCCCAGGTGTATGACCTTCGGCGACGGGTGATACGTCTTAAACAAGCCGGTGGTTCTCTTGAAAAATATTATAACGATCTCCAAGGACTTTGGCGTGAGATAGATTTTCGTCCAAATCCGATGACATGTCAAGTTGATATCCAACACTACAATACACTTATCCAAGAAGAACGAGTGTATGTGTTTTTGGATGGACTTGATGACCGCTTAGATAATATCAGAAGCGATGTTTTACAAATGAAACCGTTTCCAACAGTGGAGCAAGCATATGCACATGTTAGGAGGGAAGCTCTTCGTCAGGCAGTGATGACAGACAACTCCAATGAATTATCTGGAGCAGTTCTTGCATCTAAGGGTCTCAAATTACATAGCAGTGCTCTCATTGTGGAGGCTCGAAAGCGTCGCGATACAATTGATATCAACCCGGGAAAAGCTGCAGTAGCTACTGTCGAACCCCATCTTTCCCTCATTCCAAAATCAAGTTCCCACACCACTGAAGAAGAAGAGTCGAAAGAAGAGTCGAATTGGTCGACATTTGACTGGTTCAAAGATATTGATATACCTTCAACTGAAGTTTTTGGTGATTCTTGTCAAACTCAAACAGACCATATGAGTCCTGAAGTTGAAGTATCGGAATTCCCTCCCTCTCCAGTACTCAACGATCCATCTCCTGAGAATATCATTGAGGTAAACTCTCCTATATCTCATAATAATAATAATAATGGTGATATCTCTGTTAGCTATGAATTACCTCACAGGCATAATCAGGGAAAACCACCGAAGCGTTACTCTCCTGAAGAAGAGGATCATAGATCAAGGTATCCAATTGCTAATTATGTCTCTATGAAGGACTTGTCTGAATCCCTTAAGAAATTTGCAAATGAGCTGTCTTCATACAGTTGGGGGTGGAGGTGTCGTGCGAAATTGGCGGTGCGTGGTTCTTCAACCAACCCTCTCATTGGACTCTATGAGGAGGGTACTCATAACGTAATTGACATTCCACAATGCAAAGCTCATCATCCTAATATTAATGCTGCCGTGGAGCTGCTTAGACAAGGTATTACTGAATTAGATGTTGATCCATATCTTGAAGATGAAGGCACTGGTGAATTGCGATATGTTCAGATGGCTGTGACAACACACAACACATCTCTTCCCGCTGCACAAAGATATATGAATGGTAAGGTTCAGGTTACATTGGTTTGGAATTCAAGAAATGAAAATTCCCATGGTTCAGACAAACTGATTGCATTAGCGAATTTTCTATGGAAAAATGGTGGGCCACAGAGCAGGCTTCATTTAATTCATTCTGTGTGGGCCAACTTTCAGACTTCTGATAAAAATATAATATTTGGGAATAGATGGAGACATCTTCTTGGAGAGAGAGATTTTTGGGAACGTGTTGGTGGAATTGATGTGTCATTGGCCCCTTCTAGTTTTGGCCAGGCAAACACACGGGCTTTTGACTCCTTGCTGCAGAAGTTACAGAAATATGTTCCATATGAATCATCTGTTACTGATTTGTATGCTGGAGCTGGTGTCATTGGGTTATCATTAGCTGCCACAAGAAAGTGCAGATCCATCAAATGCGTCGAGATTAACAAAGAGTCGAAGGTATCTTTTGAGAAGACAATTGAACGCTTGCCTACCACCGTTAACAGCAGCATCACTTGGCATCATGCAGATGCTTCAAAAGATCCTTTTTCGTGGCTTGTGGGCTCAGATGTTATAGTCATTGATCCTCCTAGAAAAGGACTGGATTCATCTCTTATTGATGCATTGAAGAATATATCCTTAGTGGTCCGCAAAGCTTTGTCATCATCTGAACGCCCAAACTCAGTCCAAGAAGAGAAAAGACCATGGGTTTTACGTGCTAATGAAGCTTCAGTCCAGATTAAAAGCAAATTACCTGAAGCAAACATTACTCCATTGGTCCCACAAACCGTTATTTACATAAGTTGTGGATGGGAAAGTTTTAAAGAGGACTGCAAGTCATTATTGTCAAGTAAGGCATGGTATTTGGAAAAAGCTCATGGTTTTAATTTTTTTCCTGGTACTCAAAGCGTCGAAATTCTGGCAGTGTTCAAGAGGGGCCCTCAGAAAAAGAAACCAGGAAAGAAAAAGAAAAAACATTCGCAAGGAGCTGCTAGACATAAATGA 2892 0.4336 MAFRLISPPPSFHRFTCHATTVPPPPQISTATPISSTPQPPPLTCALHCPHFQSCSGCTHELNLHRPVILEDATNFFRKYGVTDFTFDTCNLVLILTYGNPFHPSSMADSDSNSNEVTSSSILAELTIKMTEVLNRASTSSQIGSDHTVAPIGIKLDGNNYPLWSQVVEMYISGKDKLGYINGDLPQPPQTDPTFRRWWTDNAIVKGWIINSMDSSLISNFIRFSTAKLVWDAIATTYFDGSDTSQVYDLRRRVIRLKQAGGSLEKYYNDLQGLWREIDFRPNPMTCQVDIQHYNTLIQEERVYVFLDGLDDRLDNIRSDVLQMKPFPTVEQAYAHVRREALRQAVMTDNSNELSGAVLASKGLKLHSSALIVEARKRRDTIDINPGKAAVATVEPHLSLIPKSSSHTTEEEESKEESNWSTFDWFKDIDIPSTEVFGDSCQTQTDHMSPEVEVSEFPPSPVLNDPSPENIIEVNSPISHNNNNNGDISVSYELPHRHNQGKPPKRYSPEEEDHRSRYPIANYVSMKDLSESLKKFANELSSYSWGWRCRAKLAVRGSSTNPLIGLYEEGTHNVIDIPQCKAHHPNINAAVELLRQGITELDVDPYLEDEGTGELRYVQMAVTTHNTSLPAAQRYMNGKVQVTLVWNSRNENSHGSDKLIALANFLWKNGGPQSRLHLIHSVWANFQTSDKNIIFGNRWRHLLGERDFWERVGGIDVSLAPSSFGQANTRAFDSLLQKLQKYVPYESSVTDLYAGAGVIGLSLAATRKCRSIKCVEINKESKVSFEKTIERLPTTVNSSITWHHADASKDPFSWLVGSDVIVIDPPRKGLDSSLIDALKNISLVVRKALSSSERPNSVQEEKRPWVLRANEASVQIKSKLPEANITPLVPQTVIYISCGWESFKEDCKSLLSSKAWYLEKAHGFNFFPGTQSVEILAVFKRGPQKKKPGKKKKKHSQGAARHK* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3752 963 ProSiteProfiles SAM-dependent methyltransferase RNA m(5)U-type domain profile. 500 942 IPR010280 GO:0006396|GO:0008173
Psa3g3752 963 MobiDBLite consensus disorder prediction 940 963 - -
Psa3g3752 963 Pfam gag-polypeptide of LTR copia-type 152 189 IPR029472 -
Psa3g3752 963 MobiDBLite consensus disorder prediction 441 464 - -
Psa3g3752 963 CDD AdoMet_MTases 751 847 - -
Psa3g3752 963 Pfam Conserved hypothetical protein 95 739 864 - -
Psa3g3752 963 MobiDBLite consensus disorder prediction 406 420 - -
Psa3g3752 963 MobiDBLite consensus disorder prediction 400 420 - -
Psa3g3752 963 Gene3D Vaccinia Virus protein VP39 541 842 IPR029063 -
Psa3g3752 963 Gene3D Vaccinia Virus protein VP39 885 935 IPR029063 -
Psa3g3752 963 Gene3D - 548 725 - -
Psa3g3752 963 PANTHER BNAA06G32370D PROTEIN 531 942 - -
Psa3g3752 963 PANTHER BNAA06G32370D PROTEIN 23 92 - -
Psa3g3752 963 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 48 940 IPR029063 -
Psa3g3752 963 MobiDBLite consensus disorder prediction 943 963 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3752 Psa-Chr3 327980490 327992483 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3752 - - gmx:100816889 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3752 3 327980490 327992483 Psa3g3752 3 327980490 327992483 ECH