Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3081 ATGGATACTACTCCCACCAAACAACAACATCTGAGAAAACAAAACCAACAACATCTCAAACATTCTACCTCGTTCTTCTGTCTCAGAACCTCCACAAACCCAAACCCATTTTCCATTCTTCTTTTCTGGCTTTCCAAATCCCTCAAAAGCTTCTGTTTCAGAGTCCATCTCTCACACTCCTCGCAAGGGTTTTGTTTCAAAAAGATCCACTATCATCATCATCATGGTATGGTGATTAACTCAACTCTCATATATGCAATGGAGGATTCGAGTTTATCTGAAAATGTGGGTTCTTGTAAAAAAGGAACCTTTTCTGATTTGATTGAGGAAAAGGGTTGTTGTGAGAGTAGTTCAAGTTCTGATCTTTTGTCATCTGAGAATATTGGTAATGAGGAAGAACATAGTCAGAGTAGTAGTACTGACGAAGATTCATCTTCACCACCTTCATGTAATAGTCCTCATGGAAGTGAAGATGGTAAGAAGAAACATTTGGTGGAAAAGGAATTTGTGAAACAAGTTTCAGCATTACCAGAAATTGAGATGATGAAGGAGAGGTTTGCAAAATTGTTACTTGGTGAAGATATGTCAGGTTGTGGAAATGGGGTCCCTACAGCATTGGCTATCTCAAATGCAATAACTAATCTATGTGCTACCCTATTTGGCCAACTTTGGAGATTAGAGCCTCTGCGTTCGGAGAAGAAAGCAATGTGGCGACGAGAGATGGAGTGGCTTCTTTCGGTTAGTGATCATATCGTTGAATTAACTCCGAATTGGCAGACATTTCCTGATGGAAGCAAGCTTGAGGTCATGACTTGTCGACCACGCTCGGATCTGTATGTCAATCTGCCAGCTCTGCGCAAATTAGATAACATGCTTCTTGAAATTCAAGATAGTTTTGTTGATACCGAGTTTTGGTACGTCGATCAAGGTGTTATAGCTCCAGATGCGGGTAATAGTCCGTCCTCGTTTAGGCAAGCGCTTCAGCGACAAGAAGAGAAATGGTGGCTTCCGGTTCCTCGAGTCCCGTCTTGTGGACTACACGAGAATTCGAGAAAGCAATTGCAGCACAAGCGCGATTGCACGAGCCAAATACTAAAAGCTGCCATGGCTATTAACAGTATTACTTTAGCGGAAATGGACATTCCCGAGTCTTATTTAGAGTCTCTTCCAAAGAATGCTAGAATCAGTTTGGGCGATGTTATTCATCGATATATCACGTCGGATCATTTTTCTCCCGAGTGTTTGCTAGCTTGCCTTGATTTATCTTCTGAACATCAAGCTATAGAGATCGCAAATCGAGCAGAAGCTACCATGTATATATGGCGTAAAAAGACAAATTCAAAGCCTGCTAGTGTCAGCGGAAGATCAAGTTCAAGAACATCATGGGAAATGGTCAAGGATCTAATGGTCGATGCAGACAAAAGGGAGTTGTTCGCAGATAGAGCGGAAACGCTACTTCTTTCCTTGAAGCAGCGTTTTCCCGGTCTCCCTCAAACGGCTTTGGATATGAGCAAAATCCAATACAACAAGGATGTCGGAAAAGCCATTCTCGAGAGCTACTCTCGAGTCCTCGAGAGTTTAGCATTTAACATGGTGTCGCGAATCGACGACGTTCTCTACGTAGACGACTTAACAAAAAACTCTGATCAATTCTCATCTCACTCCAAAGTCGGTGTAATTACTCGCAAGAGTATTTCACTTCCATACTCGGCGCCTGTCCCAACGACTCCATACAAATCAGCTTTCGGAACGCCGACACGCTCTCCTGCGCACGCGATTAGTCCTTCAAAGGGAGGAAAGTCTCCAGTCATCAATAATGGGAGCAAAACTCCTCAGAGAGGTGTAGGAGTGAAGAAATCTTTGACTGATTTTCTTAGCATTGATGCAAAAGGTAGTAGTTCAAATGAGAAACCAGTTTCAGAATCAAAAACAGTTGATGAAGTGCCAGCATTTGATTCCAGTGATGTTAAATAG 1974 0.424 MDTTPTKQQHLRKQNQQHLKHSTSFFCLRTSTNPNPFSILLFWLSKSLKSFCFRVHLSHSSQGFCFKKIHYHHHHGMVINSTLIYAMEDSSLSENVGSCKKGTFSDLIEEKGCCESSSSSDLLSSENIGNEEEHSQSSSTDEDSSSPPSCNSPHGSEDGKKKHLVEKEFVKQVSALPEIEMMKERFAKLLLGEDMSGCGNGVPTALAISNAITNLCATLFGQLWRLEPLRSEKKAMWRREMEWLLSVSDHIVELTPNWQTFPDGSKLEVMTCRPRSDLYVNLPALRKLDNMLLEIQDSFVDTEFWYVDQGVIAPDAGNSPSSFRQALQRQEEKWWLPVPRVPSCGLHENSRKQLQHKRDCTSQILKAAMAINSITLAEMDIPESYLESLPKNARISLGDVIHRYITSDHFSPECLLACLDLSSEHQAIEIANRAEATMYIWRKKTNSKPASVSGRSSSRTSWEMVKDLMVDADKRELFADRAETLLLSLKQRFPGLPQTALDMSKIQYNKDVGKAILESYSRVLESLAFNMVSRIDDVLYVDDLTKNSDQFSSHSKVGVITRKSISLPYSAPVPTTPYKSAFGTPTRSPAHAISPSKGGKSPVINNGSKTPQRGVGVKKSLTDFLSIDAKGSSSNEKPVSESKTVDEVPAFDSSDVK* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3081 657 ProSiteProfiles PRONE domain profile. 169 552 IPR005512 GO:0005085
Psa3g3081 657 MobiDBLite consensus disorder prediction 599 615 - -
Psa3g3081 657 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 178 546 IPR005512 GO:0005085
Psa3g3081 657 Gene3D PRONE domain, subdomain 1 411 551 - -
Psa3g3081 657 Gene3D PRONE domain, subdomain 1 170 410 - -
Psa3g3081 657 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 7 118 635 - -
Psa3g3081 657 MobiDBLite consensus disorder prediction 118 153 - -
Psa3g3081 657 MobiDBLite consensus disorder prediction 640 657 - -
Psa3g3081 657 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 118 635 IPR038937 GO:0005085
Psa3g3081 657 MobiDBLite consensus disorder prediction 582 657 - -
Psa3g3081 657 MobiDBLite consensus disorder prediction 118 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3081 Psa-Chr3 261267145 261270514 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3081 - - gmx:100800673 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3081 3 261267145 261270514 Psa3g3081 3 261267145 261270514 ECH
Psa3g3081 3 261267145 261270514 Psa7g5430 7 468379769 468382502 PCT