Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g3017 ATGAACACTACCGCTCTCTCTATAAACCCTTCTCTTCCTTCATCTTCATCATCTTCTTCACACCCTTCTGTTACCTCTCTTAGATTCCAACGTTTTTCATCATTAGGACCAAAACCCATTACTCTTTCTTGTAGAAAAACTCAATTTTGCTATTTTCAAGGGCTAAAAACGGTCAAGGGTAGAAAAAGTTTGGTGCTTGAAGCTACAAACATGGATAAAACAGAGGTTGATTCTCATGATGAAGAGGATAAGGAAGAGGGTAGTTCTTCTACTTTGGTTGACTCTGAAAATCAGAGGAATTCAAAGCCTCGGAGAATTGCTCTCTTTGTTGAGCCTTCTCCATTTGCATATGTCTCAGGATACAAAAACCGGTTTCAGAATTTTATCAAATGTCTTCGCGAAATGGGAGATGAGGTGATGGTTGTGACAACACATAAAGGAGTGCCCCAGGAGTTTTATGGAGCTAAATTAATAGGATCTTGGAGCTTTCCGCTCCCTTGGTATCAAAACGTACCCCTCTCTTTGGCACTTAGTCCAAGAATAATTTCAGAGGTAGCTCGGTTTAAGCCTGACATAATACACGCATCATCACCAGGCATAATGGTTTTTGGTGCTCTTATCATTGCTAAACTTTTATCTGTTCCAATTGTCATGTCTTATCATACCCATGTACCAGTGTACATTCCAAGATATACATTTAGTTGGCTGGTGATACCTATGTGGTGGGTCATAAAATTTCTTCACCGAGCCGCTGACCTGACTCTGGTGCCATCTGTTGCCATTGGAAGGGATCTTCAAGCGGCAAGAGTGACAGCAGCTAACAAGATTCGTCTTTGGAACAAAGGTGTTGATTCTGAAAGTTTTCATCCTCGATACCGTTCGCATGAAATGCGATTAAGGCTAAGCAACGGTGAACCTGAGAAACCCTTGATAGTTCATGTTGGACGGCTTGGAGTAGAAAAGAGTTTAGATTTTCTAAAAGGACTCATGGATAAGCTTCCTGAAGCTCGAATTGCTTTCGTTGGAGATGGACCATACAGGGTGGAGCTAGAAAAATTGTTTGAAGGAATGCCTGCGGTATTCACCGGAATGTTAGGAGGCGAAGAACTCTCTCAAGCATATGCTAGTGGAGATGTATTCGTCATGCCTTCAGAGTCCGAGACGCTTGGATTCGTTGTTTTGGAAGCCATGTCTTCAGGGATACCTGTGGTGGGCGCACGTGCCGGAGGCATTCCCGATATAATTCCTGCGGATCAAGAAGGTAAAACTGGCTATCTTTACAATCCAGGTGATCTTGAAGATTGCTTGAGTAAATTGAAGCCTCTATTGTTCGACAAAAAGTTGAGAGAAACCATAGGAAAAGCTGCCCGTGATGAGATGGAGAAATTTGACTGGAAGGCAGCCACCCGAAAGGTTCGCAATGAGCAATACAATGCTGCGATTTGGTTTTGGCGCAAGAAAAGGGCAATACTATTTAGACCGTTACAATGGATTACTAAACGTGTTTTCCCATCGCCACAAGTCAATTGTAGATGA 1536 0.4258 MNTTALSINPSLPSSSSSSSHPSVTSLRFQRFSSLGPKPITLSCRKTQFCYFQGLKTVKGRKSLVLEATNMDKTEVDSHDEEDKEEGSSSTLVDSENQRNSKPRRIALFVEPSPFAYVSGYKNRFQNFIKCLREMGDEVMVVTTHKGVPQEFYGAKLIGSWSFPLPWYQNVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLSVPIVMSYHTHVPVYIPRYTFSWLVIPMWWVIKFLHRAADLTLVPSVAIGRDLQAARVTAANKIRLWNKGVDSESFHPRYRSHEMRLRLSNGEPEKPLIVHVGRLGVEKSLDFLKGLMDKLPEARIAFVGDGPYRVELEKLFEGMPAVFTGMLGGEELSQAYASGDVFVMPSESETLGFVVLEAMSSGIPVVGARAGGIPDIIPADQEGKTGYLYNPGDLEDCLSKLKPLLFDKKLRETIGKAARDEMEKFDWKAATRKVRNEQYNAAIWFWRKKRAILFRPLQWITKRVFPSPQVNCR* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g3017 511 PANTHER GROUP 1 FAMILY GLYCOSYLTRANSFERASE 15 510 - -
Psa3g3017 511 Gene3D Glycogen Phosphorylase B; 120 467 - -
Psa3g3017 511 MobiDBLite consensus disorder prediction 1 20 - -
Psa3g3017 511 Gene3D Glycogen Phosphorylase B; 283 463 - -
Psa3g3017 511 Pfam Glycosyl transferases group 1 306 458 IPR001296 GO:0016757
Psa3g3017 511 Pfam Glycosyltransferase Family 4 123 286 IPR028098 -
Psa3g3017 511 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 106 473 - -
Psa3g3017 511 MobiDBLite consensus disorder prediction 73 99 - -
Psa3g3017 511 CDD GT4-like 105 477 - -
Psa3g3017 511 MobiDBLite consensus disorder prediction 73 90 - -
Psa3g3017 511 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 15 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g3017 Psa-Chr3 253525914 253530385 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g3017 46 419 Glycosyltransferase AT5G01220 75.936 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g3017 K06119 - gmx:100807850 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g3017 3 253525914 253530385 Psa3g3017 3 253525914 253530385 ECH
Psa3g3017 3 253525914 253530385 Psa7g5685 7 480227018 480231594 PCT