Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2456 ATGAAGAAGTTTGTGCTGAAGTTAGATTTGGCAGATGATAAGGCAAAACAGAAAGCCTTGAAGACAGTTTCAACACTCTCAGGGATTGATGCCATCACCATGGACATGAAGGAGAAGAAACTAACTGTGGTAGGGAGTGTGGATCCAGTAAAAATAGTGAGCAAACTTCGAAAATATTGGCAAGCGGATTTAATCTCTGTAGGGCCAGCAAAGGAGCCAGAGAAGAAAGAAGAGCCGAAGAAAGAAGAACCGAAGAAAGAAGAAGAGAAGAAAGAAGAGGGAAAGAAGGAGGGAGAGAAGAAAGAAGAGGAAAAGAAGGAAGAACCGAAGAAAGAAGAAGAGAAGAAAGAAGAGGGAAAGAAGGAGGAAGAGAAGAAAGAAGAGGAGAAGAAGAAAGAGCCAGCACCAGCACCAGCACCTGACCCTGTTTTAGAAATGGTGAAGGCTTATAGGGCTTATAATCCTCACATGACAACATATTATTATGTTCAAAGTATGGAAGAGAATCCCAATGCTTGTGTCATTTGTTAA 531 0.4143 MKKFVLKLDLADDKAKQKALKTVSTLSGIDAITMDMKEKKLTVVGSVDPVKIVSKLRKYWQADLISVGPAKEPEKKEEPKKEEPKKEEEKKEEGKKEGEKKEEEKKEEPKKEEEKKEEGKKEEEKKEEEKKKEPAPAPAPDPVLEMVKAYRAYNPHMTTYYYVQSMEENPNACVIC* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2456 176 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 176 - -
Psa3g2456 176 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 176 - -
Psa3g2456 176 MobiDBLite consensus disorder prediction 69 136 - -
Psa3g2456 176 Coils Coil 86 106 - -
Psa3g2456 176 Pfam Heavy-metal-associated domain 10 58 IPR006121 GO:0046872
Psa3g2456 176 MobiDBLite consensus disorder prediction 63 144 - -
Psa3g2456 176 Gene3D - 1 72 - -
Psa3g2456 176 Coils Coil 110 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2456 Psa-Chr3 209508087 209509614 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2456 - - gmx:100305540 108.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2456 3 209508087 209509614 Psa3g2456 3 209508087 209509614 ECH
Psa3g2456 3 209508087 209509614 Psa4g4883 4 422214742 422216040 PCT