Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2200 ATGGCGGATCCAATCTCCAAGCCTCTGATTGCGTTTCTGCTCATAGCTTCTCTGCTGCTGTGCTCACAAGCTTCCTCTGACGTTCCCTTCATCGTCGCTCACAAGAAGGCTTCTCTCAACAGGCTCAAGACTGGCGCTGAAAGAGTCTCTGTCACCATCGATATCTACAACCAAGGAACCTCGACGGCATATGATGTGAGTCTGGCAGATGAGAGCTGGCCAGCGGACCTTTTCAGTATAATCAGCGGTACCACTTCAAAGACATGGGAAAAGCTTGATGCTGGTGGTGTCCTCTCTCACACATTTGAGCTGGAGGCAAAATCAAAGGGAGTATTTTCTGGTGAACCAGCTGTCATCAAGTTCCGTGTTCCCACAAATGCTGCTTTACAGGAGGCACTTTCAACTCCCATATTGCCATTAGATGTTCTTGCTGACAGGCCCCCGGAGAAGAAGTTTGAATGGGTAGGTTTCTTGTATACATGA 483 0.4865 MADPISKPLIAFLLIASLLLCSQASSDVPFIVAHKKASLNRLKTGAERVSVTIDIYNQGTSTAYDVSLADESWPADLFSIISGTTSKTWEKLDAGGVLSHTFELEAKSKGVFSGEPAVIKFRVPTNAALQEALSTPILPLDVLADRPPEKKFEWVGFLYT* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2200 160 Pfam Translocon-associated protein beta (TRAPB) 15 155 - -
Psa3g2200 160 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 8 155 - -
Psa3g2200 160 PANTHER OS05G0103100 PROTEIN 8 155 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2200 K13250 - gmx:100306406 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2200 3 192344821 192347764 Psa3g2200 3 192344821 192347764 ECH