Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2181 ATGAGTAGTTGGAGAAGCCTTCTTCTACGGATCGGCGACAAAAGCCCTGAATATGGCCCCTCCTCCGACTTCAAAGACCACATTGAAACATGTTTCGGTGCCCTTCGTCGTGAGCTCGAACACTCCGAAACTGAACTTTTGGAGTTCCTTCTTACATGTTCTGAGCAATTGCCTCACAAGATTCCGTTCTATGGAACCCTGATCGGCTTGATTAACTTGGAAAGTGAGGATTTTGTGAAAAGACTGGTGGAAAAAACTCATTCTAAATTTCAGGAAGCCTTAGATACTGGAAACTGCAATGGAATTCGTATTTTAACGAGGCTGATGACTGTTATGATGTGCAGTAAAGCTCTTCAACCAAACTCTCTAGTTGGTGTCTTTGAAACATTTTTATCATCAGCTGCCACAACAGTAGACGAGGAAAAAGGGAATCCGTTATGGCAGCCATGTGCTGACTTTTACATAACTTGCATTTTATCATGCCTCCCGTGGGGTGGGGCTGAACTTGTTGAGCAAGTTCCCGAAGATATTGAGAGAGTAATGGTTGCTATAGAAGCTTACTTGAGCATCCGAAAGCATACTTCTGACACCGGTTTATCCTTTTTTGAGAATGATGATGAAATTGAGAGAGATCTTAGTAACAAGGATTTTTTGGAGGACTTATGGGACAGAATACAAGTTTTATCAAGCAATGGATGGAAAGTTGAAAGTGTTCCAAGACCCCATCTTTCCTTTGAAGCTCAGCTGGTTGCTGGGAAGTCCCATCAATTTGGGACAATAAGCTGCTCCAACTTACCAAACCTGCCTTCAGTTCCTTCTGGTGTATCTTTTGGTAAAGAGAAGCACGAGGCAGAATTAAAGTATCCTCAAAGAATACGGCGGCTAAATATATTTCCTTCCAGTAAAATGGAGGATCTGCAGCCTATAGATCGGTTTGTGGTGGAAGAATATCTCTTAGATGTGCTTCTGTATTTCAATGGCAGTCGAAAGGAATGTGCTTCTTTCATGGTTGGACTGCCGGTTACCTTCAGATATGAGTACCTCATGGCTGAGACAATATTCTCTCAGCTGCTGATGCTTCCACAACCACCTTTCAAACCAGTGTATTACACACTGGTTATTATTGACCTCTGTAAGGCTCTTCCAGGAGCTTTTCCCGCAGTTGTTGCTGGAGCAGTTCGTGCTCTCTTTGAAAAGATTGCTGATTTGGATATGGAGTGCCGAACACGACTAATCCTTTGGTTCTCACATCATTTGTCAAACTTTCAGTTCATCTGGCCTTGGGAAGAGTGGGCTTATGTGTTAGATCTCCCTAGGTGGGCCCCTCAACGTGTCTTTGTTCAAGAGGTTTTGGAGAGGGAAGTTCGCTTGTCATACTGGGACAAAGTCAAACAGAGCATTGAGAATGCACCTGGCTTAGAAGAATTGCTTCCTCCGAAGGGTGGACCAAATTTCAATCTCGGTGTAGAAGATGGTAAAGAAAACAACGAACACCTGCTGTCTGGAAATCTCAACGACATGGTTAAAGGGAAGGCACCTGTCCGTGAAATTATCTCATGGATTGATGAAAGTGTGTCTTCAAATAATAGTCTAGAAGTTACACTCAGAGTTGTCATACAAACTCTTCTCAATATTGGATCAAAGAGTTTCACTCATTTGATAACTGTATTAGAAAGATATGGGCAAGTCATTGCAAAAATATGTCCTGATGAAGATAAGCAAATTATGCTGATAGCTGAAGTCAGTTCTTTCTGGAAGAGTAACACCCAAATGACTGCAATAGCAATTGACCGAATGATGGGCTACCGGCTTATATCAAATCTGGCTATTGTGAGATGGGTCTTCTCAGAAGAAAATGTTGAGCAATTTCATTTGTCAGATCGTCCATGGGAGGTTCTTAGAAATGCAGTAAGCAAAACTTACAACCGTATTTCTGATCTAAGGAAAGAAATATCATCTCTCAAAAGGAATATTTCATCAGCTGAAGTAGCTGCCAATGAGGCGAAAACAGAGCTAGATGCTGCAGAGTCAAAACTAGGACTTGTGGACGGTGAGCCAGTTATCGGTGACAATCCTGTAAGAATGAATAGATTGAAATCACGTGCTGAAAAAGCAAAGGAAGAGCTGGTATCTATACAAGATTCTGTAGAAGCTAAAGAAGCTCTTCTTGCCCGAGCAACTGATGAAAATGAGGCATTGTTTCTCTTGTTGTTCAAAAGCTTCTCAAATGTATTGACTGATCGCCTTCCCAAAGGATCTGGAGCTAGAACACTTCGCGAATGGAAGTCTGCCCAAGTTGAAGAGATGGTAGTTGACCTCGAAGAACCTTCAACGATGGAAGTAGACAATGAGAATCAGATACCTCAAAACAGTCAGTTAAATGGTGGGAAGAAAAGTGTTGCTTATAATGTAGGTGAAAAGGAGCAGTGGTGTATCACTACTTTGAGTTATGTGAAGGCCTTTTCTAGGCAGTACGCATCTGAGATATGGGCCCATATTGAAAAGTTGGATGCAGAGGTATTGACAGAAGATGCACCTCCTCTTTTTCGATCAGCTGTTTGTTTTGGTCTTCGAAGACCAATTAATGAGGCTTGA 2595 0.4204 MSSWRSLLLRIGDKSPEYGPSSDFKDHIETCFGALRRELEHSETELLEFLLTCSEQLPHKIPFYGTLIGLINLESEDFVKRLVEKTHSKFQEALDTGNCNGIRILTRLMTVMMCSKALQPNSLVGVFETFLSSAATTVDEEKGNPLWQPCADFYITCILSCLPWGGAELVEQVPEDIERVMVAIEAYLSIRKHTSDTGLSFFENDDEIERDLSNKDFLEDLWDRIQVLSSNGWKVESVPRPHLSFEAQLVAGKSHQFGTISCSNLPNLPSVPSGVSFGKEKHEAELKYPQRIRRLNIFPSSKMEDLQPIDRFVVEEYLLDVLLYFNGSRKECASFMVGLPVTFRYEYLMAETIFSQLLMLPQPPFKPVYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLDLPRWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPGLEELLPPKGGPNFNLGVEDGKENNEHLLSGNLNDMVKGKAPVREIISWIDESVSSNNSLEVTLRVVIQTLLNIGSKSFTHLITVLERYGQVIAKICPDEDKQIMLIAEVSSFWKSNTQMTAIAIDRMMGYRLISNLAIVRWVFSEENVEQFHLSDRPWEVLRNAVSKTYNRISDLRKEISSLKRNISSAEVAANEAKTELDAAESKLGLVDGEPVIGDNPVRMNRLKSRAEKAKEELVSIQDSVEAKEALLARATDENEALFLLLFKSFSNVLTDRLPKGSGARTLREWKSAQVEEMVVDLEEPSTMEVDNENQIPQNSQLNGGKKSVAYNVGEKEQWCITTLSYVKAFSRQYASEIWAHIEKLDAEVLTEDAPPLFRSAVCFGLRRPINEA* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2181 864 Pfam MIF4G like 342 467 IPR015172 GO:0016070
Psa3g2181 864 Gene3D - 490 852 - -
Psa3g2181 864 SMART if4_15 1 229 IPR003890 GO:0003723|GO:0005515
Psa3g2181 864 SUPERFAMILY ARM repeat 2 296 IPR016024 -
Psa3g2181 864 Coils Coil 695 722 - -
Psa3g2181 864 Pfam MIF4G domain 21 196 IPR003890 GO:0003723|GO:0005515
Psa3g2181 864 Gene3D - 296 481 - -
Psa3g2181 864 SUPERFAMILY ARM repeat 478 850 IPR016024 -
Psa3g2181 864 Coils Coil 637 678 - -
Psa3g2181 864 SUPERFAMILY ARM repeat 293 478 IPR016024 -
Psa3g2181 864 Pfam MIF4G like 501 762 IPR015174 GO:0016070
Psa3g2181 864 Gene3D - 3 268 - -
Psa3g2181 864 PANTHER CAP BINDING PROTEIN 2 852 IPR027159 GO:0000339|GO:0005846|GO:0006406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2181 K12882 - gmx:100811738 1495.72