Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2171 ATGAGACAGCACAAGCAAGTACCATTCGCGAGACCGAAGATTCTGTATCTGGTGTGTGGCGCTGCATTCTTCTCCTTTCTCCTCTTCTCTATCCAATCCTCTTTCTTCACCGGCTCCTTCTATTCAGATCGCAACTCCGAATCAATTCGCGACTTGTTTCAGTTTCAGTCCAATGTTCAGCAATGTGTGGCAAATAGGGGGCTTGGACTCACTGCAGAAATTGTTGACCATTGCACATTGGTTCTTAAGTACCCCGAAGGCACCAACAGCACTTGGTACAATCAGCAGTTTAAAAAATTTGAGCCTTTGGAGTACACATATGATGTGTGTGAGGCAATACTCTTGTGGGAACAGTATCGAAACATGACCACAGTGTTGACAAGAGAGTATCTTGACGTTCGGCCTGGTGGTTGGTTAGATTATGCTCCACTAAGGATAGCACAATTGGGGGCAAAGAACTGCTATAATAAGACTCTTTGTGAAGAACACCTTAATATATTATTACCTGCAAAACCCCCATTTCACCCAAGGCAGTTTCGTACGTGTGCTGTTGTTGGGAATTCTGGGGACCTTCTGAAGACAGAATTTGGGAAAGAAATTGATAGTCATGATGCTGTTTTTCGAGACAACGAGGCCCCTGTTAATGAGAAATATGCCAAATACGTTGGTCTTAAGAGGGATTTCCGTCTAGTTGTAAGAGGTGCTGCTCGCAACATGGTTCCTATTCTAAATGGGTCTGATAATGAGGTACTCATAATCAAAAGTCTGACACACAGAGAAATCAATGCAGTTATAAAGACTATACCAAACCCAGTCTATCTCTTTCAAGGTATTGTACTGCGTCGAGGTGCCAAAGGAACTGGAATGAAGTCTATTGAATTAGCACTCTCCATGTGTGATATTGTTGATATATATGGTTTCACCGTTGATCCTGGATACACTGAATGGACAAGATACTTCTCTGATCCTAGGAAGGGACACAATCCACTTCAAGGCAGAGCATACTACCAACTTCTAGAATGTCTTGGGGATTTATTGTCAGGTAATCAGAATTCACTCCCCCATGAGATCCAAGAGGAGGCAAGACTGGTCAGATGTGCCAAGTAG 1107 0.4318 MRQHKQVPFARPKILYLVCGAAFFSFLLFSIQSSFFTGSFYSDRNSESIRDLFQFQSNVQQCVANRGLGLTAEIVDHCTLVLKYPEGTNSTWYNQQFKKFEPLEYTYDVCEAILLWEQYRNMTTVLTREYLDVRPGGWLDYAPLRIAQLGAKNCYNKTLCEEHLNILLPAKPPFHPRQFRTCAVVGNSGDLLKTEFGKEIDSHDAVFRDNEAPVNEKYAKYVGLKRDFRLVVRGAARNMVPILNGSDNEVLIIKSLTHREINAVIKTIPNPVYLFQGIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEWTRYFSDPRKGHNPLQGRAYYQLLECLGDLLSGNQNSLPHEIQEEARLVRCAK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2171 368 Pfam Glycosyltransferase family 29 (sialyltransferase) 161 239 IPR001675 GO:0006486|GO:0008373
Psa3g2171 368 PANTHER SIALYLTRANSFERASE-LIKE PROTEIN 1 7 344 IPR044782 GO:0008373|GO:0009846|GO:0009860
Psa3g2171 368 Gene3D Glycosyl transferase family 29 119 346 IPR038578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2171 Psa-Chr3 190555268 190561914 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2171 64 343 Glycosyltransferase AT1G08660 87.857 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2171 - - gmx:100527382 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2171 3 190555268 190561914 Psa3g2171 3 190555268 190561914 ECH