Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2168 ATGATAACGGCCAATACGGCGGTGCTATTCGCCGTTTTGATGACGGCGATATGCGCAGTGCAATCCGAGTACATAGAGTACAACACTACACACAGAATCATCCCCAACAAAATCAATGTTCACTTGGTTCCTCACTCTCACGATGATGTTGGCTGGCTTAAAACCGTCGATCAGTACTACGTCGGATCCAACAACTCCATTCGTGGTGCATGTGTGCAGAACGTGCTTGATTCTGTGATGTCCGCACTCTTGGAGGATCAAAACCGCAAGTTTATATATGTTGAAATGGCATTTTTCCAGAGATGGTGGAGGCAGCAAAGTAAAGCTATGAAACTTAAAGTCAAAGAGCTTGTCAACTCGGGTCAGCTCGAATTCATAAATGGTGCTATGTGCATGCATGATGAGGCCACCCCTCATTATATTGACCTGATTGATCAGACCACTCTAGGGCATCAGTTCATCAAAGATGAGTTTGGTAAGATTCCAAGAGTTGGCTGGCAGATTGATCCGTTTGGCCATTCTGCAGTTCAGGCATACTTGCTTGGAGCTGAGCTAGGATTCGATTCCCTCTTTTTTGCTAGAATTGATTACCAAGATAGAGCCAAACGATTAAAGGACAAAACTCTAGAGATTGTTTGGCAGGGTTCCAAGTCTCTTGGTTCATCTTCACAAATATTTACTGGGATATTTCCTAGGCATTATGACCCTCCTGATGGTTTCACGTTCGAGATACACGATGTTTCCTCTCCTATTCAAGATGACATTCTACTGTTTGACTATAATGTTGAAGAAAGAGTCAATGACTTTGTATCTGCTGCCTTAGCTCAGGCTAATGTGACCAGGACGAATCACATAATGTGGACAATGGGGACAGACTTCCGCTATCAATATGCTAATTCATGGTTTAGGCAGATGGATAAGTTTATTCACTATGTCAATCAGGATGGTCGAGTCAATGCATTGTATTCAACACCATCTATCTACACTGATGCAAAATATGCAGCTAATGAGAAATGGCCACTTAAAATTGATGATTTCTTCCCGTATGCTGATCATCCTAATGCATATTGGACTGGTTATTTTACAAGTAGGCCAGCTTTAAAGGGTTATGTGAGAGTGATGAGTGGTTACTATCAGGCAGCAAAGCAGTTGGAATTTTTTAAAGGGAGAAATAAATCAGGACCAAATACTGATGCATTAGCCAATGCTTTAGCACTTGCTCAGCACCATGATGCTGTTAGTGGCACGGAAAGACAGCATGTTGCTGCTGATTATGCAAAGCGGATCTCTATAGGCTATGCCGAGGCAGAAGGCTTGGTTGCATCTGCTCTTGCTTTATTGGTAAACCAAAGGTTAAGTTCACACGTGATGAACCCGATAACAGGCTTCCAGCAGTGTCCTCTTCTTAACATAAGCTACTGTCCTCCGTCAGAAACTACCTTGGATAATGGGAAAAGCGTGGTGATTGTTGTTTATAACCCTCTTGCTTGGAAGAGAGAGGAAGTGATTCGAATTCCTGTTTCCACTGCAGAAGTTTTTGTCCAGGACTCTGCTGGGAAGAAAATTGAGTCTCAGCTCTTGCCTGTATCTAACATTACTTCGAGCATAAGGAAAAAATATGTCAAAGCATATATAGGAACAGCTCCTTCTAGGGAACTCAGGTACTGGCTTGCATTTCCGGTATCTGTACCCCCCATTGGTTTCAGTACCTATATAGTATCAAGGCCTAGACAGACAGGTCATGTTTCAACTATCTCAAAGGAGTTCAGATCAGAAGGAAGTACTAATAACAGCATAGAAGTTGGACAAGGGAATCTAAAGCTCCTTTATTCTGCAAATGAAGGAAAATTGACTCATTATGTTAACAACAGAAATCTAGTTACAGCATCAGTTGAACAATCATACAGTTTTTATTCTGGAAACGTTGGGGATGATAAAGATTCTCAGGCTTCCGGGGCATACGTCTTCCGTCCAAATGGCTCGTTTCCCATTAAATCTGATCAGCAGGCATCTTTTACTGTCCTGCGTGGTCCGATATTGGATGAAGTACATCAACAGCTCAATCCATGGGTATCTCAGATTGTGAGGATATATCAGGCAAAGGAGCATGCTGAAGTTGAGTTCACTATTGGGCCTATACCTGTGGATGATGGCATTGGGAAAGAAGTTATTACTCAATTTTCAACTACAATGAAGACCAACAAGACATTCTACACAGATTCTAATGGACGTGACTTCATCAAAAGGATTCGAGATTTCAGGACTGACTGGGATCTAGAAGTGAACCAACCTGTAGCTGGAAATTATTACCCGGTTAATTTAGGAATATATATGCAAGATAGTGGTATGGAACTCTCAGTTTTGGTGGACCGCTCCGTCGGTGGTTCCAGTTTGGTAGATGGTCAAGTAGAGCTGATGCTTCACAGGAGGTTGCTTCATGATGATGCAAGAGGTGTTGGAGAGACACTTAATGAAACTGTTTGCATTGCTGATAAATGTGAAGGCTTAACTATTCAAGGAAAACTGTACCTTAGAATTGACCGTAAAGATGAAGGTGCTAAATGGCGCCGTACAGTTGGCCAGGAAATATATTCACCATTGTTGTTGGCCTTCACAGAGCAGGATGAGGATAATTGGTTGCATTTTCAACAACCAACATTCTCTGGCATAGACTCTTCCTACAGTTTACCAAACAACACCGCACTTCTAACTCTCCAAGATTTTGGAAACGGAAAAGTACTCCTAAGACTAGCTCACCTTTATGAGGTTGGAGAAGACAAAGACTATTCGGTAACTGCAAATGTAGAATTGAAAAGGCTTTTCCCTAACAAGAAGATTAGTAAAGTGACAGAGATGAGTTTGTCTGCTAATCAAGAAAGAGGTGAAATGGAAAAGAGGAAACTAGTTTGGAAGGTAGAAGGAGGCTTCACTGAAGAATCTAAGGTGGTGAGAGGAGGACCGGTGGATCCTACAAAGCTTGTTGTTGAACTTGCTCCAATGGAGATTCGGACATTCTTTGTTGATTTTGATCTTCTCCAAACAGTTCACGCAGCAGAAAATCATGTAATGTAA 3072 0.4193 MITANTAVLFAVLMTAICAVQSEYIEYNTTHRIIPNKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIRGACVQNVLDSVMSALLEDQNRKFIYVEMAFFQRWWRQQSKAMKLKVKELVNSGQLEFINGAMCMHDEATPHYIDLIDQTTLGHQFIKDEFGKIPRVGWQIDPFGHSAVQAYLLGAELGFDSLFFARIDYQDRAKRLKDKTLEIVWQGSKSLGSSSQIFTGIFPRHYDPPDGFTFEIHDVSSPIQDDILLFDYNVEERVNDFVSAALAQANVTRTNHIMWTMGTDFRYQYANSWFRQMDKFIHYVNQDGRVNALYSTPSIYTDAKYAANEKWPLKIDDFFPYADHPNAYWTGYFTSRPALKGYVRVMSGYYQAAKQLEFFKGRNKSGPNTDALANALALAQHHDAVSGTERQHVAADYAKRISIGYAEAEGLVASALALLVNQRLSSHVMNPITGFQQCPLLNISYCPPSETTLDNGKSVVIVVYNPLAWKREEVIRIPVSTAEVFVQDSAGKKIESQLLPVSNITSSIRKKYVKAYIGTAPSRELRYWLAFPVSVPPIGFSTYIVSRPRQTGHVSTISKEFRSEGSTNNSIEVGQGNLKLLYSANEGKLTHYVNNRNLVTASVEQSYSFYSGNVGDDKDSQASGAYVFRPNGSFPIKSDQQASFTVLRGPILDEVHQQLNPWVSQIVRIYQAKEHAEVEFTIGPIPVDDGIGKEVITQFSTTMKTNKTFYTDSNGRDFIKRIRDFRTDWDLEVNQPVAGNYYPVNLGIYMQDSGMELSVLVDRSVGGSSLVDGQVELMLHRRLLHDDARGVGETLNETVCIADKCEGLTIQGKLYLRIDRKDEGAKWRRTVGQEIYSPLLLAFTEQDEDNWLHFQQPTFSGIDSSYSLPNNTALLTLQDFGNGKVLLRLAHLYEVGEDKDYSVTANVELKRLFPNKKISKVTEMSLSANQERGEMEKRKLVWKVEGGFTEESKVVRGGPVDPTKLVVELAPMEIRTFFVDFDLLQTVHAAENHVM* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2168 1023 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 900 1006 IPR041147 -
Psa3g2168 1023 SUPERFAMILY Families 57/38 glycoside transferase middle domain 354 449 IPR028995 -
Psa3g2168 1023 PANTHER ALPHA-MANNOSIDASE 11 1013 - -
Psa3g2168 1023 PANTHER ALPHA-MANNOSIDASE 11 1013 - -
Psa3g2168 1023 CDD GH38N_AMII_LAM_like 38 314 - -
Psa3g2168 1023 Gene3D - 473 598 IPR013780 -
Psa3g2168 1023 Pfam Alpha mannosidase middle domain 355 447 IPR015341 GO:0004559|GO:0006013
Psa3g2168 1023 Gene3D Glycoside hydrolase family 38, central domain 398 452 IPR037094 GO:0004559|GO:0006013
Psa3g2168 1023 Gene3D - 884 1013 - -
Psa3g2168 1023 SUPERFAMILY Galactose mutarotase-like 456 1009 IPR011013 GO:0003824|GO:0005975|GO:0030246
Psa3g2168 1023 Gene3D Glycoside hydrolase 38, N terminal domain 38 318 IPR027291 -
Psa3g2168 1023 SMART Alpha_mann_mid_2 355 429 IPR015341 GO:0004559|GO:0006013
Psa3g2168 1023 Gene3D - 599 865 - -
Psa3g2168 1023 Pfam Glycosyl hydrolases family 38 C-terminal domain 603 817 IPR011682 GO:0004559|GO:0006013
Psa3g2168 1023 Gene3D Glycoside hydrolase family 38, central domain 319 397 IPR037094 GO:0004559|GO:0006013
Psa3g2168 1023 Pfam Glycosyl hydrolases family 38 N-terminal domain 39 350 IPR000602 GO:0004559|GO:0006013
Psa3g2168 1023 SUPERFAMILY Glycoside hydrolase/deacetylase 27 353 IPR011330 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2168 Psa-Chr3 190442778 190452025 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2168 9 948 Glycoside Hydrolase AT3G26720 72.476 0.0 1455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2168 K01191 - gmx:100795651 1785