Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2155 ATGTCGTGTGTGCCAGCAAGAACGGGGAGACAAAGACAGCGTTATGAAGACAACCTTCGACTTGTTTCTGGATGTATTCCGTATAGATGGAGAAAGGAGAATGGAGATGAGATGGAAGAAACTGAGGAAATGATAGAAGTACTTATGGTTTCTTCGCCAAAACGCGACGACCTTGTATTTCCAAAGGGTGGTTGGGAGGATGATGAGACTATCATAGAAGCTGCTTGTCGTGAAGCTTTAGAAGAAGCAGGAGTTAAAGGAATTTTAAGAGAAACTCCATTAGGAATGTGGGAATTCAGAAGCAAAAGCAGTCAGGACTTGTGTAGCATGGAAGGAGGCTGCAGAGGATACATGTTTGCCTTGGAGGTGACCGAAGAACTAGACGCATGGCCTGAGCAGAAAAACCGTGCTCGCCAATGGTTGAACATAAAAGAGGCATTTAGACTCTGCCGATACGATTGGATGTGTAACGCACTCGAGGAGTTTACAAAAGTTATGGCAGAGGATACGATGCTAAGGAAGCAAGACAAGAATGTCGTCGACCTCCCTTCAGTCATCTCAACAGATGCCTCGGAATGTCAAAGTGTGTCGCCCAACTGCTACAAAAGATCATCGAATATGCAGCACCACGGTGTGCCTTCTAAGGCGAATCTACTGCAACGCGCTTCTCAAGAGATAGCCATCCATTTTGGCTATTGA 699 0.4564 MSCVPARTGRQRQRYEDNLRLVSGCIPYRWRKENGDEMEETEEMIEVLMVSSPKRDDLVFPKGGWEDDETIIEAACREALEEAGVKGILRETPLGMWEFRSKSSQDLCSMEGGCRGYMFALEVTEELDAWPEQKNRARQWLNIKEAFRLCRYDWMCNALEEFTKVMAEDTMLRKQDKNVVDLPSVISTDASECQSVSPNCYKRSSNMQHHGVPSKANLLQRASQEIAIHFGY* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2155 232 Pfam NUDIX domain 46 152 IPR000086 -
Psa3g2155 232 PANTHER NUDIX HYDROLASE 12, MITOCHONDRIAL 1 191 - -
Psa3g2155 232 ProSitePatterns Nudix box signature. 63 84 IPR020084 GO:0016787
Psa3g2155 232 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 191 - -
Psa3g2155 232 SUPERFAMILY Nudix 17 165 IPR015797 -
Psa3g2155 232 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 166 - -
Psa3g2155 232 CDD Nudix_Hydrolase_9 21 155 - -
Psa3g2155 232 ProSiteProfiles Nudix hydrolase domain profile. 18 163 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2155 Psa-Chr3 189510689 189513600 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2155 K07766 - gmx:100794003 384.8