Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2134 ATGAAAGAGACGTCGTTATCCACCGCCTCACCTCCACCGGAGTTAGAAGACGGATGCTTACGTCACGTTGGCGACTGTCACGACATCCACGACGACGGCGCTTCGTTCGATGTCTTTTTACTGGACGACGAAGGCTTCCCGTCACAAGTCCCAGGGGAAGACGCTTCACCAAACGAATCTGAGAAAAGCAGTTTCGCCGCCGATTTCTATCGCTCCGGATCCGATTGCTCGTCGCTGTTGTCGCCAGACGTTAACCGACACAGGGACCTCACGCTCGCGCCGGATTCGTTGTCTTCCGGGAAGAAACTGAAGCAGGCCAATCTGTTCCAGATTTGGGGATTCAAAAGAAGTGTTGCTGTTGGTTCTGTTGAATTTGAGTCCAGACAAGGTGGTTATTGTGATGATATAGGTGAGGGTAGTGTTTCATCTGAGAAGAAGAAGATTGTTACACCTGGAAGTTGGGGTTCGATTTTGCGTGACAAAGGGAAAGTGGTTGAGAAATCAAATTCTTCTAGTAAGAGAAAGAGTTTACATGGAGAGAATAGGGTTACGCGTTCGTGTCCCTTTTATAAGAAAATGCCAGGAACAAACTTCACAGTTGATGCTTTTCGTTATGGATGTGTTGAGGAGTGCTCAGCTTACTTTCTTAGTCATTTCCATGCTGATCACTATGGTGGTCTTAGCAAGAAATGGTCACATGGTCCTATTTATTGCTCTCCTCTTACTGGACGGCTAGTTAAAATGTGTCTCTATGTAAATCCTTCGTACATATGCCATTTGGAATTTGACACCGAATATGTGATTGATGGTATCAAAGTGACTTTGATAGATGCTAACCATTGCCCCGGTGCAGCTTTGATTCACTTTGAGCTCCCAAATGGACAACGTTATTTGCATACTGGGGACTTTAGAGCTTGTAAACTGATGCAAGACTACCATCTTTTTGTAAATAAACGTGTGAATGTACTATATCTGGATACTACGTATTGCAACCCAAAGTACAAGTTTCCTTTCAAGGAAGATGTACTAAACTATGTTGTCAAAATTACAAAGAACCACCTCAAAATGCATCCCAGAACTTTAGTGGTTGTTGGGGCATACAGTATTGGCAAGGAATGTGTATATCTTGCAATTTCTAAGGCACTTGGGGTAAAAATATATGCAAATGCTTCAAGAAGAAGGATTTTACTAGCTTATGATTGCCCTGACTATTCAGACAGGCTCTGTACAAATGGAAATAACACCCTTCTCCATGTTATGCCCATGTCATCTCTGAGAATTGAGACTTTGAAGGAATATTTGAAAACCTACAAGGAACAATTCACATCAGTATTAGCATTTCGTCCAACAGGTTGGACTTTTAGTGAGAAGATAGGCAATGATTTGGAACTAATTAAACCTGTTTCCAAAGGAAATATAACGATATATGGGGTTCCCTACAGTGAGCATTCCAGCTTCACAGAACTGCGAGATTTTGTTCAGTTTTTAAGGCCTGACAAGATAATTCCTACTGTGAATGTTGGTAATGCTGCTAATCGAGAAAAGATGCAATCTTACTTTCGAGATTGGTTGAAGGGATGA 1581 0.4225 MKETSLSTASPPPELEDGCLRHVGDCHDIHDDGASFDVFLLDDEGFPSQVPGEDASPNESEKSSFAADFYRSGSDCSSLLSPDVNRHRDLTLAPDSLSSGKKLKQANLFQIWGFKRSVAVGSVEFESRQGGYCDDIGEGSVSSEKKKIVTPGSWGSILRDKGKVVEKSNSSSKRKSLHGENRVTRSCPFYKKMPGTNFTVDAFRYGCVEECSAYFLSHFHADHYGGLSKKWSHGPIYCSPLTGRLVKMCLYVNPSYICHLEFDTEYVIDGIKVTLIDANHCPGAALIHFELPNGQRYLHTGDFRACKLMQDYHLFVNKRVNVLYLDTTYCNPKYKFPFKEDVLNYVVKITKNHLKMHPRTLVVVGAYSIGKECVYLAISKALGVKIYANASRRRILLAYDCPDYSDRLCTNGNNTLLHVMPMSSLRIETLKEYLKTYKEQFTSVLAFRPTGWTFSEKIGNDLELIKPVSKGNITIYGVPYSEHSSFTELRDFVQFLRPDKIIPTVNVGNAANREKMQSYFRDWLKG* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2134 526 Pfam DNA repair metallo-beta-lactamase 405 509 IPR011084 -
Psa3g2134 526 CDD SNM1A-1C-like_MBL-fold 178 332 - -
Psa3g2134 526 PANTHER DNA CROSS-LINK REPAIR PROTEIN SNM1 84 525 - -
Psa3g2134 526 SUPERFAMILY Metallo-hydrolase/oxidoreductase 209 519 IPR036866 -
Psa3g2134 526 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 84 525 - -
Psa3g2134 526 Gene3D - 335 483 - -
Psa3g2134 526 SMART Lactamase_B_5a 105 334 IPR001279 -
Psa3g2134 526 Gene3D - 194 505 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2134 Psa-Chr3 187885440 187889278 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2134 K15340 - gmx:100790844 785.793