Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2082 ATGGAAAAAGCTTCGATTTTGAGAATGGTGTTAATGTTAGGGTTGTTGGGTTTGTATGCGGAAGGGCTTGGTGTGAACTGGGGAACACAAGCAACTCACAAGTTGCCTCCAGAAACGGTTGTTCAGATGTTGAAGGATAATGGGATTCAAAAAGTTAAGCTTTTTGACGCAGATGATACTACAATGAGTGCTTTGGCTGGGAGTGGAATTGAAGTGATGGTTGCAATCCCTAATAATCAGCTTGCTGATATGAATGATTATAAACGTGCTCAGCAATGGGTTAGGAAGAATGTCACTCGTTATAACTTCGATGGTGGCGTTAAGATCAAATATGTAGCAGTTGGGAATGAGCCATTTTTGAAATCCTACAACAATTCGTTCTTGAACATCACACTACCTGCACTGCAGAACATTCAAAATGCCATAAATGAAGCCGGTCTTGGAGACGCTGTTAAGGCTACTGTGCCTTTAAATGCCGACGTGTATGAGTCTCCGGTGGACAATCCTCTTCCATCTGCAGGAGTATTTAGGCCTGATATCAACGGCCTCATGACTCAGATGGTACAATTTCTCAATAAGAATGCTGCACCATTTACTGTCAACATTTACCCCTTCTTAAGTCTTTATGGAAACGACGATTTCCCTTTCAACTACGCCTTCTTTGACGGGGTAGACAAACCGATAAACGATAACGGAATCCAATATACCAACGTCTTCGACGCAAATTTCGATACATTGGTTTCTGCTCTCAAATCAGTCGGTTTTGGCGACACCCCAATTTTGGTAGGAGAAGTAGGATGGCCTACAGAAGGCGACAAGAGTGCCACCACCGGAAATGCAATAAGATTCTACAACGGCCTCCTTTCAAGGCTCGCTGCGAACAAAGGAACCCCTCGTCGTCCTGGATTCATTGAAGTTTATCTCTTCGGATTCATCGACGAAGACGCAAAGAGCATCGCTCCTGGTAACTTCGAGAGACACTGGGGAATCTTCCGATACGACGGACAGCCAAAGTTTACAATGGATCTCTCAGGTCAAGGTCAAAACAAGCTTCTAATCGGTGCACAAAACGTGAAGTATCTTGATCAATCATGGTGCGTGTTTAATCCTGACGCTAAAGATCTCAGCAAACTTAACGACAATATCAATTACGCTTGCACCTATGGAGATTGCACTGCACTCGGATATGGATCTTCTTGCAACAACCTTGATGCCAATGGAAATGCTTCTTATGCATTCAACATGTACTACCAGGTACAGAATCAGGATCATCAAGCTTGCAATTTTCAAGGATTAGCTAAGATTACTACAGAGAATATTTCATCACCTACTTGCAATTTCCTCATTCAGATTGTTCCTTCTTCAGCGTCTTCTTCTATGCCCTCATTTGCAGTTTTGTTGTTCATTGCTGCTTTGTCTATGATTCTCTTGGCTTAG 1437 0.4287 MEKASILRMVLMLGLLGLYAEGLGVNWGTQATHKLPPETVVQMLKDNGIQKVKLFDADDTTMSALAGSGIEVMVAIPNNQLADMNDYKRAQQWVRKNVTRYNFDGGVKIKYVAVGNEPFLKSYNNSFLNITLPALQNIQNAINEAGLGDAVKATVPLNADVYESPVDNPLPSAGVFRPDINGLMTQMVQFLNKNAAPFTVNIYPFLSLYGNDDFPFNYAFFDGVDKPINDNGIQYTNVFDANFDTLVSALKSVGFGDTPILVGEVGWPTEGDKSATTGNAIRFYNGLLSRLAANKGTPRRPGFIEVYLFGFIDEDAKSIAPGNFERHWGIFRYDGQPKFTMDLSGQGQNKLLIGAQNVKYLDQSWCVFNPDAKDLSKLNDNINYACTYGDCTALGYGSSCNNLDANGNASYAFNMYYQVQNQDHQACNFQGLAKITTENISSPTCNFLIQIVPSSASSSMPSFAVLLFIAALSMILLA* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2082 478 Gene3D Glycosidases 22 350 - -
Psa3g2082 478 Pfam X8 domain 365 433 IPR012946 -
Psa3g2082 478 Gene3D - 359 459 - -
Psa3g2082 478 SMART X8_cls 364 447 IPR012946 -
Psa3g2082 478 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Psa3g2082 478 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 2 465 IPR044965 GO:0004553|GO:0005975
Psa3g2082 478 SUPERFAMILY (Trans)glycosidases 23 341 IPR017853 -
Psa3g2082 478 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 2 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2082 Psa-Chr3 183438701 183441900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2082 4 452 Miscellaneous Gene Families AT1G64760 76.169 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2082 - - gmx:100815300 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2082 3 183438701 183441900 Psa3g2082 3 183438701 183441900 ECH