Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2054 ATGATGAAATACAAGAACCCTAAAGAATCAAATGAAGTTAGGGTTGAGGATCTTCTTAACCGGATGAATCTCGAGGAGAAAATCGGTCAAATGTTACAGATTGAGCGCAAGTGCGCATCTGACAATGTGGTCAAAAACTATTTCATAGGGAGTGTTTTGAGCGAGGGAGGGAGTGTTCCAGTTCCAAAGGCTTCTGCTGAAAACTGGATTGATATGTTGAATGAATTTCAGAAGGATGCTTTATCAACAAGGCTTGGAATTCCAATTTTTTATGGGATTGATGCTATTCATGGCCACAACACCGTTTACAACGCAACTATTTTTCCTCACAATATTGGCCTTGGAGCTACAAGGGATCCTGAACTAGTCAAGAGAATTGGAGCTGCAACCGCACTTGAAGTTAGAGCAACAGGAATTCAGTATGCTTATGCACCATGTGTAGCAGTCTGTAGAGATCCAAGATGGGGTCGGTGTTATGAAAGCTACAGCGAAGATCCTAAAGTAGTTCAAGCTATGACTGAAATCATATCAGGATTGCAAGGGGACATCCCTGATAATATGCTAAATGGTGTTCCTTTTATTGCTGGAAAAGAAAAGGTTCTAGCTTGTGCTAAGCACTACGTTGGTGATGGTGGAACAATCAATGGGATTGATGGGAGTAATACTGTTATAGATCGAAATGGATTGATGGAAATTCACATGCCAGGCTACTTAAGCGCCATTAGCAAGGGTGTGGCAACTGTCATGTTATCTTACTCAAGTTGGAATGATGTAAAAATGCATGCTCATCATGACCTTATTACTGGTTTCCTCAAAAATACTCTCCATTTCCAGGGCTTTGTCATTTCAGATTATGAGGGTATTGACAGGATCACCACTCCGCATCGTGCAGACTGCACTTATTCACTTAAAGCAGGAGTCTCCGCCGGCATTGACATGTTCATGGTTCCAAAGTTTTACAAGGAATTCATTGACGGTCTAACAACATTGGTGAAAAATGAAGTCATTCCTATGAGTCGAATTGATGATGCTGTGAGAAGAATTTTGCGCGTTAAATTCATGATGGGAATTTTTGAGAACCCTTTTGCTGATTATAGTTTGGTTAATTATCTTGGGACTAAGGAACATAGAGAACTTGCTAGAGAAGCTGTAAGGAAATCCATGGTCCTTCTAAAAAATGGCAAATCTGATGAAAAGCCTTTGCTACCTCTTCCTAAAAAGGCTCCGAAAATACTTGTGGCCGGAAGCCATGCAAATAATCTAGGATATCAGTGTGGTGGCTGGACCATTGAATGGCAAGGAGTCAGTGGCAACGATATTCTCGAAGGGACTACAATTCTCGATGCTATAAAGAACACGGTTGATCCAGAGACGGTAGTGATCTACGAGGAGAACCCTGATATAGAATTTGTTAAATCCAATGGATTTTCCTACGCTATAGTCGTAGTAGGAGAGAAACCTTATGCTGAAAGTCATGGTGACAACATGAACTTAACAATCCCAAACCCTGGTCCCGAGACGATAACAAATGTCTGTGGAGCTTTAGAATGTGCGGTTGTGATTATCTCCGGACGGCCTTTGGTTATCGAACCGTATGTTGGTTTGATGGATGCAGTTGTTGCTGGTTGGCTACCAGGTAGTGAAGGACAAGGTGTGGCTGATGTTTTGTTTGGTGAGTATGGTTTCACAGGAAAGCTTCCAATAACATGGTTCAAAAGTGTTGATCAACTTCCAATGAATGTTGGAGATGCTCATTATGATCCTCTTTTTCCATTTGGGTTTGGCCTTACTACCGAACCTACTAAGGCTATTTATTTTCAGTAG 1824 0.4139 MMKYKNPKESNEVRVEDLLNRMNLEEKIGQMLQIERKCASDNVVKNYFIGSVLSEGGSVPVPKASAENWIDMLNEFQKDALSTRLGIPIFYGIDAIHGHNTVYNATIFPHNIGLGATRDPELVKRIGAATALEVRATGIQYAYAPCVAVCRDPRWGRCYESYSEDPKVVQAMTEIISGLQGDIPDNMLNGVPFIAGKEKVLACAKHYVGDGGTINGIDGSNTVIDRNGLMEIHMPGYLSAISKGVATVMLSYSSWNDVKMHAHHDLITGFLKNTLHFQGFVISDYEGIDRITTPHRADCTYSLKAGVSAGIDMFMVPKFYKEFIDGLTTLVKNEVIPMSRIDDAVRRILRVKFMMGIFENPFADYSLVNYLGTKEHRELAREAVRKSMVLLKNGKSDEKPLLPLPKKAPKILVAGSHANNLGYQCGGWTIEWQGVSGNDILEGTTILDAIKNTVDPETVVIYEENPDIEFVKSNGFSYAIVVVGEKPYAESHGDNMNLTIPNPGPETITNVCGALECAVVIISGRPLVIEPYVGLMDAVVAGWLPGSEGQGVADVLFGEYGFTGKLPITWFKSVDQLPMNVGDAHYDPLFPFGFGLTTEPTKAIYFQ* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2054 607 SUPERFAMILY (Trans)glycosidases 2 387 IPR017853 -
Psa3g2054 607 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 388 597 IPR036881 GO:0004553|GO:0005975
Psa3g2054 607 Gene3D - 373 599 IPR036881 GO:0004553|GO:0005975
Psa3g2054 607 PANTHER BETA-D-GLUCOSIDE GLUCOHYDROLASE 1 605 - -
Psa3g2054 607 PRINTS Glycosyl hydrolase family 3 signature 84 100 IPR001764 GO:0004553|GO:0005975
Psa3g2054 607 PRINTS Glycosyl hydrolase family 3 signature 108 127 IPR001764 GO:0004553|GO:0005975
Psa3g2054 607 PRINTS Glycosyl hydrolase family 3 signature 154 170 IPR001764 GO:0004553|GO:0005975
Psa3g2054 607 PRINTS Glycosyl hydrolase family 3 signature 200 216 IPR001764 GO:0004553|GO:0005975
Psa3g2054 607 PRINTS Glycosyl hydrolase family 3 signature 270 288 IPR001764 GO:0004553|GO:0005975
Psa3g2054 607 Gene3D - 1 372 IPR036962 GO:0004553|GO:0005975
Psa3g2054 607 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 1 605 - -
Psa3g2054 607 Pfam Glycosyl hydrolase family 3 N terminal domain 24 351 IPR001764 GO:0004553|GO:0005975
Psa3g2054 607 Pfam Glycosyl hydrolase family 3 C-terminal domain 388 597 IPR002772 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2054 Psa-Chr3 182348916 182351523 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2054 2 602 Glycoside Hydrolase AT5G20950 69.884 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2054 K05349 - gmx:100800077 1029.62