Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2053 ATGTTGAATGAATTTCAGAAGGATGCTTTATCAACAAGGCTTGGAATTCCAGTTTTTTATGGGATTGATGCTATTCATGGCCACAACACCGTTTACAATGCAACTATTTTTCCTCACAATATTTACCTTGGAGCTACAAGGGATCCTGAACTAGTCAAGAGAATTGGAGCTGCAACCGCACTTGAAGTTAGAGCAACAGGAATTCAGTATGCTTATGCACCATGTGTAGCAGTCTGTAGAGATCCAAGATGGGGTCGGTGTTATGAAAGCTACAACGAAGATCCTAAAGGTGTTCCTTTTATTGCTGGAAAAGAAAAGGTTCTAGCTTGTGCTAAGCACTATGTCGGTGATGATGGAACAATCAATTGGATTGATGAGAGTAATACTATTATAGATCGAAATGGATTGTTGGAAATTCACATGCGAGGCTACTTAAGCGCCATTAGCAAGGGTGTGGCAACCGCCATCTGGGTGATGCCCGTCACCCTCCACCTGAAGACAAAAATTGCATTTATTCCAAGGGAGTCCCCTTGA 534 0.4213 MLNEFQKDALSTRLGIPVFYGIDAIHGHNTVYNATIFPHNIYLGATRDPELVKRIGAATALEVRATGIQYAYAPCVAVCRDPRWGRCYESYNEDPKGVPFIAGKEKVLACAKHYVGDDGTINWIDESNTIIDRNGLLEIHMRGYLSAISKGVATAIWVMPVTLHLKTKIAFIPRESP* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2053 177 Gene3D - 1 166 IPR036962 GO:0004553|GO:0005975
Psa3g2053 177 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 1 96 - -
Psa3g2053 177 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 93 156 - -
Psa3g2053 177 Pfam Glycosyl hydrolase family 3 N terminal domain 4 154 IPR001764 GO:0004553|GO:0005975
Psa3g2053 177 PANTHER BETA-D-GLUCOSIDE GLUCOHYDROLASE 93 156 - -
Psa3g2053 177 PANTHER BETA-D-GLUCOSIDE GLUCOHYDROLASE 1 96 - -
Psa3g2053 177 PRINTS Glycosyl hydrolase family 3 signature 13 29 IPR001764 GO:0004553|GO:0005975
Psa3g2053 177 PRINTS Glycosyl hydrolase family 3 signature 37 56 IPR001764 GO:0004553|GO:0005975
Psa3g2053 177 PRINTS Glycosyl hydrolase family 3 signature 83 99 IPR001764 GO:0004553|GO:0005975
Psa3g2053 177 SUPERFAMILY (Trans)glycosidases 2 154 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2053 Psa-Chr3 182341011 182341881 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2053 1 156 Glycoside Hydrolase AT5G20940 65.537 3.27e-78 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2053 K05349 K01188 gmx:100816705 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2053 3 182341011 182341881 Psa3g2053 3 182341011 182341881 ECH