Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2039 ATGGAGATAGGTTTGGCTGATAAAGTAAGAGAAAGAGTTGGTTATGTGAAAAGGGTCATTGCTAAGAATAGGAACAAACCTTATTGTAGAGTTAAGAGACATGTTCCAAAGTCACTTCAGCAGCTATTTCATTCATGCAAACAAACATTCAAAGGTCCTGAAACTGTTCCTGTAACACAAGATGTTCACAAACTTTGTCACATACTAGATAACATGAAGCCAGAGGATGTTGGACTAAGCAGAGATCTGCAGTTTTTCAAACCTGGAAACATTATTAAAGAGAATCAAAGGGTCACATACACCACTGTCTACAAATGTGACAATTTCTCTGTGTGTATCTTTTTCCTACCTGAAAGAGGAGTCATTCCTCTCCATAACCACCCTGGGATGACTGTTTTCAGCAAGCTTCTATTAGGACAAATGCACATTAAGTCTTATGATTGGGTTGATCCGGAGGCCTCTCACAGCTCCAAATTGAGGTTGGCAAAGTTAAAAGCAAACAAAGTTTTCACATCATCATGTGATACCTCGGTATTGTATCCAACAACGGGAGGCAACATTCATGAATTCACAGCTATAACTCCATGTGCTGTTCTTGATGTCATTGGTCCACCTTACTCCAAAGAAGATGACAGAGACTGTTCATATTACAAAGATTTCCCGAATGAAAAAGAGATCGATGAGGGGAAAGATGAAAAAGACAGTTACGCATTGTTAGAAGAAATTGAGATGCCAGAAAATTGTCAAATGGATGGAATTGAATATTTGGGACCTCCTATTGATAACACTGTTTTTTAG 798 0.3847 MEIGLADKVRERVGYVKRVIAKNRNKPYCRVKRHVPKSLQQLFHSCKQTFKGPETVPVTQDVHKLCHILDNMKPEDVGLSRDLQFFKPGNIIKENQRVTYTTVYKCDNFSVCIFFLPERGVIPLHNHPGMTVFSKLLLGQMHIKSYDWVDPEASHSSKLRLAKLKANKVFTSSCDTSVLYPTTGGNIHEFTAITPCAVLDVIGPPYSKEDDRDCSYYKDFPNEKEIDEGKDEKDSYALLEEIEMPENCQMDGIEYLGPPIDNTVF* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2039 265 Pfam PCO_ADO 68 260 IPR012864 GO:0016702
Psa3g2039 265 CDD cupin_ADO 107 207 - -
Psa3g2039 265 Gene3D Jelly Rolls 30 233 IPR014710 -
Psa3g2039 265 PANTHER CYSTEINE OXYGENASE/2-AMINOETHANETHIOL DIOXYGENASE, RMLC-LIKE JELLY ROLL FOLD PROTEIN-RELATED 35 260 - -
Psa3g2039 265 SUPERFAMILY RmlC-like cupins 36 224 IPR011051 -
Psa3g2039 265 PANTHER UNCHARACTERIZED 35 260 IPR012864 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2039 Psa-Chr3 181400882 181402934 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2039 K23953 - gmx:100805411 397.512