Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2038 ATGAAGGTCGTTGCACTTGTTAGCGGCGGCAAAGACAGTTGCTACGCCATGATGAAGTCTATTCAATATGGCCACCAGATTGTTGCGTTGGCGAATTTGATGCCGGTTGATGATTCCGTCGACGAGCTTGATAGTTACATGTTTCAAACGGTTGGGCATCAAATTATCATCAACTATGCCGAATGTATGGGATTGCCATTGTTTAGGAGGCGAATACAAGGATCCTCAAGGCATCTAGAGCTTGGCTACAAAACAACTCAAGGTGATGAAGTTGAAGATATGTATATTTTATTACGCGAAGTGAAAAGGCAGATACCCTCAGTTACTGCTGTGTGTTCTGGAGCCATTGCATCTGACTATCAGAGACTGCGGGTGGAAAGTGTATGTTCAAGGTTAGGCCTTGTTTCTCTTGCATACTTATGGAAACAAGACCAGTCCTTGCTCCTCCATGAAATGATTTCAAATGGAATAGTAGCTATAACTGTGAAGGTAGCTGCCATGGGTTTGGATCCTGCGAAGCACTTGGGTAAAGAATTAGCCATGTTAAATGCTTATTTGCATAAATTGAAAGAGGCATATGGAATCAATGTTTGTGGTGAAGGAGGGGAGTATGAAACATTGACCCTAGATTGCCCGCTCTTTATTAATGCTCGCATTGTGCTTGACAAATATCAAGTTGTGATGCACTCTTCAGACTCCATAGCTCCCGTGGGAGTCCTTCATCCCTTGGCATTTCATTTGGAAAATAAGGCAGACATTCAGTCTTTAGAAACAGTAGACAAAATACATGAGGGTCGTATGCAGAAACGAGGACCTGTGTTCGAAGTGCATGATAGTCTAGAAAGATTGGAAGCCACATGCAAGCCTCTTGATTTCGCTGATCAAATCGATGGCGTAGAACATAAATTTAAGATTTCAAGAACAAATAACAAGAGCACGTTCTCCATAGGTTGCTGGTTGCAAGATTCATGCAATGGTTTGCGGGAGGATTTAACAATTGTTTTGAGAAAAATTGAATCACAACTAGAAGGCTTTGGTTTTGGCTGGGAGAATGTTCTCTATATTCATCTTTACATTGATGACATGAATAAGTTCTCCGAGGCAAATGAAACATATGTGAAGTTTATAACACATGAGAAGTGCCCATTTGGCGTCCCATCCCGTAGTACAGTTGAAATGCCTCTAGTTGAAATGGATTTTAGTAGAGCATATATGGAGGTTTTGGTATCGAATAATAAAGATAAAAAGGTTTTGCATGTACAAAGTATTTCCTGTTGGGCACCTAGTTGCATTGGGCCATACAGCCAGGCAACCTTACATGAGGGTATACTTCTCATGGCTGGTCAACTGGGGCTTGACCCTCCTACAATGAATCTTTGCAGTGGGGCCCCTGGGGTTGAACATGAACAGGCACTAAAAAACAGTGAAGCAATAGCAAAATCTTTTAATTGTTCAATATCGACATCTGCAATTGCTTTTGTTATTTACTGTTCTAAAAACATCTCTTCATTGGATAGACTCGATATCGAGAAGAAACAAGAAACAATCCTCAGACAAATGAAGATATCTGATTTACAGGAAGGCAAGAAGTACAGAGCATTAGAACCCATAACCCTTTATGTCCTTGTTTCTGATCTACCTAAAAGAGCTTTTGTAGAAGTGAAGCCTATTCTTTATGTCGAGGATGGCGCAGATGCAGCAATTGAGACCATAACAGAGAAACCTTGTTCAAAGGCATCATGTTATTGGGGTTTCAAGCAGGAAAATTGGCATGATTCTTGCATTCAGAAATGTGTGATTCCTGGAAAGATATGTGCCATTATATTATCTATCACAAGCGAGCTTGCTGCAAAGATATGTTCTGATTCTCTGCCGGCTGATTATGTCAATGATAATAGTCAACATTTTCTATCTAAAGGACATATGGAGCAGTTATCAAAATTCTGCATTTATCTTCTTGACAAAGCTATAACAGATAACAACTTCGCCTGGGAAGATATACTGAGTTTGAGGTTCTACATCCCGGTAAGCCTTCAAATGTCAGTCAAGCTAATACAACCTATGTTCAGCAATGCACTTTTTGAACTCTCTGAAATGAATCAAAGGAAAGTTAAAAATTGTGAGGAGCCGATCTTCAACATAGTTCCCGTCATAGGTGCTGGGTGGTCTGCTTCATCTATGGATGATGTAGTGACCTGCGAATTACTAGCTCGAAAATCCTGA 2223 0.4049 MKVVALVSGGKDSCYAMMKSIQYGHQIVALANLMPVDDSVDELDSYMFQTVGHQIIINYAECMGLPLFRRRIQGSSRHLELGYKTTQGDEVEDMYILLREVKRQIPSVTAVCSGAIASDYQRLRVESVCSRLGLVSLAYLWKQDQSLLLHEMISNGIVAITVKVAAMGLDPAKHLGKELAMLNAYLHKLKEAYGINVCGEGGEYETLTLDCPLFINARIVLDKYQVVMHSSDSIAPVGVLHPLAFHLENKADIQSLETVDKIHEGRMQKRGPVFEVHDSLERLEATCKPLDFADQIDGVEHKFKISRTNNKSTFSIGCWLQDSCNGLREDLTIVLRKIESQLEGFGFGWENVLYIHLYIDDMNKFSEANETYVKFITHEKCPFGVPSRSTVEMPLVEMDFSRAYMEVLVSNNKDKKVLHVQSISCWAPSCIGPYSQATLHEGILLMAGQLGLDPPTMNLCSGAPGVEHEQALKNSEAIAKSFNCSISTSAIAFVIYCSKNISSLDRLDIEKKQETILRQMKISDLQEGKKYRALEPITLYVLVSDLPKRAFVEVKPILYVEDGADAAIETITEKPCSKASCYWGFKQENWHDSCIQKCVIPGKICAIILSITSELAAKICSDSLPADYVNDNSQHFLSKGHMEQLSKFCIYLLDKAITDNNFAWEDILSLRFYIPVSLQMSVKLIQPMFSNALFELSEMNQRKVKNCEEPIFNIVPVIGAGWSASSMDDVVTCELLARKS* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2038 740 Pfam Endoribonuclease L-PSP 427 557 IPR006175 -
Psa3g2038 740 Pfam Endoribonuclease L-PSP 328 399 IPR006175 -
Psa3g2038 740 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 241 - -
Psa3g2038 740 SUPERFAMILY YjgF-like 325 396 IPR035959 -
Psa3g2038 740 SUPERFAMILY YjgF-like 416 562 IPR035959 -
Psa3g2038 740 Pfam Diphthamide synthase 1 230 IPR002761 -
Psa3g2038 740 PANTHER DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN 1 739 IPR030662 -
Psa3g2038 740 TIGRFAM MJ0570_dom: MJ0570-related uncharacterized domain 1 231 IPR002761 -
Psa3g2038 740 CDD eu_AANH_C_2 434 558 - -
Psa3g2038 740 Gene3D - 409 560 IPR035959 -
Psa3g2038 740 Gene3D HUPs 1 157 IPR014729 -
Psa3g2038 740 Gene3D - 160 256 - -
Psa3g2038 740 Gene3D - 301 408 IPR035959 -
Psa3g2038 740 CDD Alpha_ANH_like_IV 2 214 IPR002761 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2038 K06927 - gmx:100807009 1226.85