Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g2013 ATGATTGTGAATATTGGGAATGAGGGTGTTGGTGCTGGAGAAAGAGACAGAGGGTGGTTTAGGAGATTTGGAAGCTTCATTAGGAGGAAGCAAGTTGATTCTGCTCATCACAGGAGTCATTCTCAATTGGCTAGGAAGTTATCTGTAGTTGATCTTGTTGGAATTGGGGTTGGAGCTACAATAGGAGCTGGAGTGTATATTCTTATTGGAACAGTTGCTAGGGAGCAGGCAGGACCAGCACTTGTATTATCAATCTTAATTGCAGGAATAGCCGCTGCGCTATCAGCTTTCTGTTATGCAGAACTTGCATGTCGATGTCCGTCAGCAGGGAGTGCTTATCATTATACCTACATATGCATTGGAGAAGGGGTTGCTTGGTTGGTAGGTTGGTCCTTGATTCTAGAATATACAATTGGTGCTTCAGCTGTTGCTCGTGGCATAACCCCGAATCTGGCCTTGTTTTTTGGTGGTGAAGACAACCTACCTTCATTTCTGGCTCGTCATACCTTACCGGGTCTTGGAATAGTGGTTGATCCATGTGCAGCTGTATTAATTATTCTTATTACCATCCCCTTGTGCCTTGGAATCAAGGAGAGTTCAACAGTACAATCCATTGCGACAACCATAAATGTCTCTGTCATGCTATTCATCATTACAGTTGGTGGATATCTAGGTTTCAAAACCGGATGGGTTGGTTATGATCTCCCGAGCGGGTTTTTTCCTTACGGAGTGAATGGGATGTTTGCTGGGTCTGCAGTCGTTTTCTTTTCATACATTGGTTTTGATACAGTTTCCGGTACAGCTGAGGAGGTCAAAAATCCTCAACGAGATTTGCCAATCGGCATATCAACTGCATTAGCTATATGCTGCGTTCTGTATATGCTTGTATCAGCAGTTATTGTTGGCTTAGTACCGTATTATGCATTGAACCCTGACACCCCAATCTCCTCAGCATTTTCTATCTATGGGATGGAATGGGCAGTGTATATAATAACAACCGGAGCTGTCACTGCTCTTTTTTCCAGTTTGTTGGGGTCAGTTCTTCCTCAGCCACGGCTCTTTATGGCAATGGCTAGGGATGGCCTTCTACCCTCCTTCTTCTCAGATATCTATAGGCGCACACAGATTCCTTTGAAAAGCACTATTGTCACTGGTCTTTTTGCTGCTGTTCTTGCATTCTTTATGGATGTTTCTCAGTTAGCAGGAATGGTTAGCGTGGGAACATTGCTTGCCTTTACCACGGTTGCAGTTTCAGTTTTGATAATCAGATATGTTCCACCTAATGAAGTTCCAGTTCCAGCTTCACTTCTAACATCTGTTGATCCATTATTGAACCAATCTGGTAGTGATATTGAAGAAGAAACGACCATGAGTCCCGTAGATCTTGCTAGTTATTTTGATAATAGTGACCTACATGACAAGCCAGACATCCGGCTTGAACATCCTTTAATCATAAAAGAAGTGACCAAAGAGGAACAGAATGAGAATACTAGGAGAAAATTTGCCGGATGGAGCATATCCTTTCTATGTATAGGGATTCTCATGGTAACCGGTGCAGCTTCAGTCGAAAGGTGTCCCAGGGTTTTGCGCGTTACATTGTTTGGCGTGGGTGTAATTGTTCTTTTCTGCAGCATAATTGTACTGGCCTGCATAAAGCAAGATGATACCAGACACAGCTTTGGACACTCTGGAGGTTTTGCTTGCCCATTTGTTCCATTCCTACCTGCTGCCTGCATTCTTATAAACACCTACTTACTAATTGATCTTGGGGCTGCTACATGGCTAAGAGTTTCTGTGTGGCTGTTAATCGGGCTACTTATATACTTGTTCTATGGACGAACTCACAGTTCATTGTTAAATGCAATCTATCTTCCTTCTGCCCGTGCTGATGAGATCCATCGATCTCAAGCAAATCATTTAGCCTAG 1926 0.432 MIVNIGNEGVGAGERDRGWFRRFGSFIRRKQVDSAHHRSHSQLARKLSVVDLVGIGVGATIGAGVYILIGTVAREQAGPALVLSILIAGIAAALSAFCYAELACRCPSAGSAYHYTYICIGEGVAWLVGWSLILEYTIGASAVARGITPNLALFFGGEDNLPSFLARHTLPGLGIVVDPCAAVLIILITIPLCLGIKESSTVQSIATTINVSVMLFIITVGGYLGFKTGWVGYDLPSGFFPYGVNGMFAGSAVVFFSYIGFDTVSGTAEEVKNPQRDLPIGISTALAICCVLYMLVSAVIVGLVPYYALNPDTPISSAFSIYGMEWAVYIITTGAVTALFSSLLGSVLPQPRLFMAMARDGLLPSFFSDIYRRTQIPLKSTIVTGLFAAVLAFFMDVSQLAGMVSVGTLLAFTTVAVSVLIIRYVPPNEVPVPASLLTSVDPLLNQSGSDIEEETTMSPVDLASYFDNSDLHDKPDIRLEHPLIIKEVTKEEQNENTRRKFAGWSISFLCIGILMVTGAASVERCPRVLRVTLFGVGVIVLFCSIIVLACIKQDDTRHSFGHSGGFACPFVPFLPAACILINTYLLIDLGAATWLRVSVWLLIGLLIYLFYGRTHSSLLNAIYLPSARADEIHRSQANHLA* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g2013 641 Gene3D Amino acid/polyamine transporter I 42 441 - -
Psa3g2013 641 Gene3D Amino acid/polyamine transporter I 486 625 - -
Psa3g2013 641 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 20 634 - -
Psa3g2013 641 PIRSF AA_transporter 23 437 - -
Psa3g2013 641 PIRSF AA_transporter 492 622 - -
Psa3g2013 641 Pfam Amino acid permease 47 429 IPR002293 GO:0016020|GO:0022857|GO:0055085
Psa3g2013 641 Pfam C-terminus of AA_permease 566 616 IPR029485 -
Psa3g2013 641 PANTHER CATIONIC AMINO ACID TRANSPORTER 4, VACUOLAR 20 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g2013 Psa-Chr3 179244643 179250283 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g2013 25 641 Organic Solute Cotransporters AT3G03720 64.032 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g2013 K13863 - gmx:100810218 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g2013 3 179244643 179250283 Psa1g2051 1 149218889 149236430 PCT