Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1971 ATGTCTTCAAGAACATTGAGGAGAAGACTCCATCACGGGGATGTCGATGGCAAAAGGAAGGATCATTTGGATACGTCCGAGTTAGATTCTTTGAATGAGCCCTTGTTGGGGGGTGATGATTATATTGAGAACAAGAAGATATGTACACTTGAAGATTTGTGGGATGATGAGAGGAAGAAGGCGCAAATTCATTGGACATTCTTGTTTTCAAACCTTATCGCGCAATGGGCACAGTGGTTAGCGAACGTTGTAATCGGGTCTGGGTCTCTTCTTGGTCGTCTTTTATCTCTTCCTTCTAACGCTCTTTACTTGCAAAATAATAGGATGCTGCCTCCACCTCTTAGCCCTGTGCAGGAAGAAAGACTAAGAAACTTACGGCAACGGCTTGAAGTCCCTTTTGATGGTTCTAAAACAGAGCACCAAGAAGCTCTTTTACTATTGTGGAGATTGGCTTATCCCGACAGGGAGCTTCCTTCACTTAAATCAGATGTTTGGAAGGAAATGGGATGGCAAGGTTCAGACCCATCAACAGATTTTAGGGGTGGAGGATTTATATCATTAGAGAACCTCATCTTTTTCGCGCAGAAGTATCCAGCTTCATTCCAGCGATTGTTGCTTAAACAAGATGGAGTCAGAGCAGAGTGGGAATATCCATTTGCAGTAGCTGGAATCAATATTTCATTTATGTTGGTGCAGATGCTGGATCTTCAATCAGTTCATCCATCTTCTTTGCCAGGAATCTATTTTCTACGGCTGCTTGAGGAGGATGAAATGGCATTTGATATCCTTTTCTGCATCGCCTTTCAAATGATGGATGCTCAGTGGCTAGCAAAGCGTGCTACATATATGGAATTTAACGATGTTTTGAAGTCAACAAGAACGCAGTTAGAGCGGGAGCTTGCTCTTGAAGACATCTCCAGTATAAAAGATTTACCTGCTCACAACATGTTGTGA 954 0.4266 MSSRTLRRRLHHGDVDGKRKDHLDTSELDSLNEPLLGGDDYIENKKICTLEDLWDDERKKAQIHWTFLFSNLIAQWAQWLANVVIGSGSLLGRLLSLPSNALYLQNNRMLPPPLSPVQEERLRNLRQRLEVPFDGSKTEHQEALLLLWRLAYPDRELPSLKSDVWKEMGWQGSDPSTDFRGGGFISLENLIFFAQKYPASFQRLLLKQDGVRAEWEYPFAVAGINISFMLVQMLDLQSVHPSSLPGIYFLRLLEEDEMAFDILFCIAFQMMDAQWLAKRATYMEFNDVLKSTRTQLERELALEDISSIKDLPAHNML* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1971 317 ProSiteProfiles ELMO domain profile. 139 300 IPR006816 -
Psa3g1971 317 PANTHER ENGULFMENT AND CELL MOTILITY 8 317 - -
Psa3g1971 317 Pfam ELMO/CED-12 family 124 289 IPR006816 -
Psa3g1971 317 PANTHER ELMO/CED-12 FAMILY PROTEIN 8 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1971 Psa-Chr3 175604931 175609874 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1971 K23538 - gmx:100799350 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1971 3 175604931 175609874 Psa3g1971 3 175604931 175609874 ECH