Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1968 ATGACTTTCTCAAAAGCTTCTTCCACTTTTCTTAGGATCTACCTCATTATAGTTTCTTGTGTTGCTGCATCTCAATGTAATGCTGCTGACCGAATTTCAACCCTAGTTGTAAATGCTTCTCATGGATCTGGAAGGCCTATTCCTAACACACTTTTTGGAGTTTTTTTTGAGGAGATTAATCATGCCGGTACCGGGGGATTGTGGGCGGAACTTGTGAACAATAGAGGGTTTGAAGCCGGGGGAAGGCAGTTTCTGTCAAATATTGATCCTTGGACCATAGTTGGAACTGACTCATTGGTTTCAGTACAAACTGAGCTTAGTTCTTGTTTTGAACACAATAAAGTTGCTTTGAGAATTGATGTGCTATGTGATAAGTGTCCTTCTCATGGTGTTGGAATATCTAACCCAGGTTTTTGGGGCATGAATATTGTGAAAGGAAAGAAATACAGAGTAGTGTTCTTTGTTCGTTCAATAGGAGCACTAGATATAACAATTTCATTTAGAAATGCACAAGGTGGAAGAATATTGGCTTCTACCAATGTCAGAGCTTCTGCGTTAGAGGTTTCGAATTGGAAAAGGATGGAAACAACATTAGTAGCAACTGCATCAAGTTCTAATTCAAATCTTGAATTAACAACAACTCAAAAAGGGAAGATATGGTTGGATCAAATATCTGCTATGCCCGTTGACACATTTAAGGGACATGGTTTCAGAAGTGACTTGGTTGACATGCTGATTCAGTTGAAACCAGCTTTTCTAAGATTTCCAGGTGGTTGTTTCATTGAAGGACAAACATTAAGAAATGCATTTAGGTGGAAAGATAGTGTTGGACCATGGGAACAAAGACCTGGACACTTTGGTGATGTTTGGAACTATTGGACTGATGATGCATTGGGTTATTTTGAAGGTCTTCAACTAGCAGAGGACATTGGTGCAGCACCAGTGTGGGTCTTCAACAACGGTATAAGCCATACTGATGAAATTGATACAAGGGTCATTGCACCTTTTGTGCAGGAAGCACTTGATGGTATTGAGTTTGCTAGAGGTAAATCCACTTCAAAATGGGGGTCCCTTAGAGCATCTATGGGACATCCTCAACCTTTTAACCTAAAATATGTTGGTGTTGGAAATGAAGATTGTGGCAAAAGAAATTACCGTGGAAATTATCTAGCCTTCTACAATGCAATACGACGCGTTTATCCAGACATTCAAATTATTTCGAATTGTGATGCTTCTCTCAAGCCGTTAGATCATCCGGCTGATTTGTATGATTATCATACTTATCCTCTTGATGCTCAACATATGTTTAGTAATGCTCATGTTTTCGATAAGACACCGCGCAATGGACCAAAGGCTTTTGTGAGTGAGTATGCTCTAGTTGGAGAGGAACAAGCTAAGTATGGAACCCTTTTGGGAGCTGTGTCTGAAGCTGGATTCCTTATTGGATTAGAAACAAACAGTGATCATGTTGTAATGGCAAGCTATGCACCACTTTTTGTAAATGCACATGACAGAAAGTGGAATCCAGATGCAATTGTTTTTGACAACAATCAAGCTTATGGAACTCCTAGCTATTGGGTGCAGTATATGTTTAGAGAGTCAAATGGAGCAACATTTCTCAACTCACAACTTCTTACAACTGATCCCAACTCACTGGCTGCATCTGCAATTCTTTGCCATAATCCTCTAAATAATAATACTTACTTAAAAATAAAGGTTGCCAACATAGGGAACAATCAAGTGAACCTCAAGATTTCTCTTAAGGGATTTGGGAGCAAGATTCAAACTGCGTCGACAAAGACTGTACTCACATCTAAAAATGCATTAGATGAGAATAGCTTCTTAGATCCAAAAAAGATAACACCACAGCAAAGTCAACTCAAGAGTCCTTCCAATGAGATGAATGTCATAATTCCTCCAGTTTCATTAACAGTATTTGATATGTTAAGATAG 1953 0.3897 MTFSKASSTFLRIYLIIVSCVAASQCNAADRISTLVVNASHGSGRPIPNTLFGVFFEEINHAGTGGLWAELVNNRGFEAGGRQFLSNIDPWTIVGTDSLVSVQTELSSCFEHNKVALRIDVLCDKCPSHGVGISNPGFWGMNIVKGKKYRVVFFVRSIGALDITISFRNAQGGRILASTNVRASALEVSNWKRMETTLVATASSSNSNLELTTTQKGKIWLDQISAMPVDTFKGHGFRSDLVDMLIQLKPAFLRFPGGCFIEGQTLRNAFRWKDSVGPWEQRPGHFGDVWNYWTDDALGYFEGLQLAEDIGAAPVWVFNNGISHTDEIDTRVIAPFVQEALDGIEFARGKSTSKWGSLRASMGHPQPFNLKYVGVGNEDCGKRNYRGNYLAFYNAIRRVYPDIQIISNCDASLKPLDHPADLYDYHTYPLDAQHMFSNAHVFDKTPRNGPKAFVSEYALVGEEQAKYGTLLGAVSEAGFLIGLETNSDHVVMASYAPLFVNAHDRKWNPDAIVFDNNQAYGTPSYWVQYMFRESNGATFLNSQLLTTDPNSLAASAILCHNPLNNNTYLKIKVANIGNNQVNLKISLKGFGSKIQTASTKTVLTSKNALDENSFLDPKKITPQQSQLKSPSNEMNVIIPPVSLTVFDMLR* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1968 650 SMART alpha_l_af_c 455 642 IPR010720 GO:0046373|GO:0046556
Psa3g1968 650 Gene3D Glycosidases 211 534 - -
Psa3g1968 650 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 1 649 - -
Psa3g1968 650 Gene3D - 538 649 IPR013780 -
Psa3g1968 650 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 1 649 - -
Psa3g1968 650 Pfam Alpha-L-arabinofuranosidase C-terminal domain 456 642 IPR010720 GO:0046373|GO:0046556
Psa3g1968 650 SUPERFAMILY (Trans)glycosidases 206 539 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1968 Psa-Chr3 175332875 175337151 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1968 34 650 Glycoside Hydrolase AT3G10740 61.192 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1968 K01209 - gmx:100780771 1007.28