Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1967 ATGCATTTCGATGGAAAAGCTTCAGTTGGACCTTGGGAGGAGAGACCAGGGCACTTCGGTGATGTATGGAAGTACTGGACTGATGATGGAATTGGATATTTTGAGTTCCTCCAACTATCAGAAGACTTGGGCGCTTTACCAATATGGGTATTCAATAATGGTGTAAGCCATACTGATGAAGTTGATACGTCCGCCGTTTTACCTTTTGTGCAAGAAGCCCTTGATGGACTTGAGTTTGCGAGAGGCGACCCGACTTCAAAATGGGGTTCCGTTAGAGCTGCTATGGGACATCCGGAGCCATTTAACCTAAAATACGTTGCTGTTGGAAATGAGGATTGTGGAAAAAAGAACTATCGTGGAAACTACTTGAGGTTCTATAGTGCAATAAGACATGCTTATCCTGATATTAAAATCATCTCGAACTGCGACGCTTCTTCGACTCCTCTAGACCACCCTGCCGATCTTTATGATTATCATATTTATACTGGCGCGGATGACATGTTTTCTAGATCTACAGTATTTAACCGAGTAACACGAAGTGGTCCAAAGGCATTTGTAAGTGAGTATGCGGTGACGGGAAAGGATGCCGGGCAAGGAAGTCTTTTGGCAGCCCTAGCTGAAGCTGGATTCCTCATTGGTCTGGAAAAGAACAGTGACATTATCGATATGGCTAGCTATGCTCCCCTTTTCGTAAATGCCAATGATAGGAGGTGGAATCCCGATGCAATTGTATTCAACTCTTTTCAGCTCTTCGGAACTCCTAGCTACTGGATGCAGTTATTTTTCTCAGAGTCAAATGGAGCAACACTTCTGAATTCATCGCTTCAAACGAATTCCTCGAAAACACTAATTGCATCAGCAATCACTTGGCAAAATTCTGTTGATAAGAAAAATTACATACGAATAAAGGCTGTGAACTACGGTGCCAGTGCCGTGAACCTCAAGATTTCTATCAATGGATTGGACCCAAATTCATTGCAGTCATCTGGATCAACAAAAAGCGTGCTTACATCTGCAAATGTAATGGATGAAAATTCCTTCTCGCAGCCGAAAAAGGTGGTTCCAATCCAGAGTCTACTTCAAAATGTTGGGAAGGACATGAATGTGATAGTTCCGCCGCATTCATTCACATTACTTGATTTGTTGAAAGAAACCAATAAGCTGATGATGCCAGAGAGTGATTCATCCACAAGATCTTCTATTTAA 1206 0.4245 MHFDGKASVGPWEERPGHFGDVWKYWTDDGIGYFEFLQLSEDLGALPIWVFNNGVSHTDEVDTSAVLPFVQEALDGLEFARGDPTSKWGSVRAAMGHPEPFNLKYVAVGNEDCGKKNYRGNYLRFYSAIRHAYPDIKIISNCDASSTPLDHPADLYDYHIYTGADDMFSRSTVFNRVTRSGPKAFVSEYAVTGKDAGQGSLLAALAEAGFLIGLEKNSDIIDMASYAPLFVNANDRRWNPDAIVFNSFQLFGTPSYWMQLFFSESNGATLLNSSLQTNSSKTLIASAITWQNSVDKKNYIRIKAVNYGASAVNLKISINGLDPNSLQSSGSTKSVLTSANVMDENSFSQPKKVVPIQSLLQNVGKDMNVIVPPHSFTLLDLLKETNKLMMPESDSSTRSSI* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1967 401 SUPERFAMILY Glycosyl hydrolase domain 254 380 - -
Psa3g1967 401 SUPERFAMILY (Trans)glycosidases 8 270 IPR017853 -
Psa3g1967 401 SMART alpha_l_af_c 187 375 IPR010720 GO:0046373|GO:0046556
Psa3g1967 401 Pfam Alpha-L-arabinofuranosidase C-terminal domain 188 375 IPR010720 GO:0046373|GO:0046556
Psa3g1967 401 Gene3D Glycosidases 1 263 - -
Psa3g1967 401 Gene3D - 264 381 IPR013780 -
Psa3g1967 401 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 3 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1967 Psa-Chr3 175328073 175330290 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1967 3 398 Glycoside Hydrolase AT3G10740 70.960 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1967 K01209 - gmx:100787207 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1967 3 175328073 175330290 Psa3g1967 3 175328073 175330290 ECH