Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1948 ATGGAGGGGAAAAACAAGAGGCTAGCAGTTTTGGTAGGGTGCAACTACCCAAACACTCCAAATGAATTACATGGTTGCATAAATGATGTGTTGGCTATGAAGGAAACATTGGTGAAGCGGTTTGGTTTCGATCATTCCAATATCGAGCTTCTCACCGATGAACCTAAAAGTTCTTCGTCAACTATGCCAACTGGTGCTAACATTAAGCAAGCATTAGCTAACATGGTTGATCGAGCTGAATCAGGGGATGTTCTTTATTTTCATTATAGCGGACATGGAACTAGGATTCCTTCAATGAAATATGGACATCTTTTTCGACACGAAGAAGCTATTGTACCTTGTGATTTCAATCTTATCACAGATTTGGACTTCCGGCAAGTCGTGAATCGGATTCCGAAAGGATCAAGCTTAACAATTCTCTCAGATTCATGTCATAGTGGAGGCCTAATTGACAAAGAAAAAGAACAAATTGGACCATCCAAATTGGAAGAACAAAAGAATGCCACATTGAAACAAACTCATAATAAACCAAAAACTATTCCTTATGAGTCAATACTTCAACATCTTTCATCATTAACAAACATAAACACAACAGACATTGGAACTCATTTACTCGAATTCTTCGGCTCCGAAGCAAGTATGTTGTTTCAGCTTCCTTTACATGATCTCGATTTGTTCCAACCACTAAATCCGGATGAAGGGATTCTGTTAAGTGGTTGTCAATCTGACGAAACTTCGGCGGATATGAGTCCGAATACGAGTAATGGAAAAGCTTATGGAGCATTTAGCAATGCAGTTCAGATTGTGTTGAAGGATAATATTGGTAAATTGAGTAATAGAGAGGTTGTGATGAAGGCTAGAGATTTTCTACAAAGACAAGGGTTTGTGCAACATCCTTGTCTTTATTGTAGTGATGAGAATGCTGATGATGTCTTCTTGTTGCAATCCTAG 951 0.3859 MEGKNKRLAVLVGCNYPNTPNELHGCINDVLAMKETLVKRFGFDHSNIELLTDEPKSSSSTMPTGANIKQALANMVDRAESGDVLYFHYSGHGTRIPSMKYGHLFRHEEAIVPCDFNLITDLDFRQVVNRIPKGSSLTILSDSCHSGGLIDKEKEQIGPSKLEEQKNATLKQTHNKPKTIPYESILQHLSSLTNINTTDIGTHLLEFFGSEASMLFQLPLHDLDLFQPLNPDEGILLSGCQSDETSADMSPNTSNGKAYGAFSNAVQIVLKDNIGKLSNREVVMKARDFLQRQGFVQHPCLYCSDENADDVFLLQS* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1948 316 Pfam Caspase domain 6 306 - -
Psa3g1948 316 Gene3D - 1 200 - -
Psa3g1948 316 Gene3D - 226 315 - -
Psa3g1948 316 SUPERFAMILY Caspase-like 1 117 IPR029030 -
Psa3g1948 316 PANTHER METACASPASE-4 2 315 - -
Psa3g1948 316 PANTHER METACASPASE-9 2 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1948 Psa-Chr3 174554066 174555117 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1948 - - gmx:100781510 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1948 3 174554066 174555117 Psa3g1948 3 174554066 174555117 ECH