Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1946 ATGGCTTCACAACAACAAACTGTTCGTGAATGGTCAGGAATCAATACATTCGCTCCTGCTACACAGACTAAGTTGCTTGAACTCTTGGGAAACCTTAAACAAGAGGATGTGAACTCCTTAACCATACTTGTGATGGGAAAAGGTGGCGTTGGGAAGTCTTCAACTGTGAACTCCATCATTGGAGAAAGGGTGGTTTCAATTAGTCCCTTTCAGTCTGAAGGGCCAAGACCTGTTATGGTGTCACGATCAAGGGCAGGTTTTACATTGAACATTATCGACACTCCTGGTCTTATTGAAGGGGGATACATCAATGATATGGCGCTTAATATAATAAAAAGTTTCCTTCTGGACAAGACCATAGATGTTCTGCTTTACGTGGACCGCTTAGATGCGTATCGAGTAGACAACTTGGATAAGTTAGTCGCCAAAGCTATAACTGATAGTTTTGGCAAAGGAATATGGAACAAGGCTATAGTAGCACTCACACATGCCCAATTCTCTCCACCAGATGGGTTGCCTTATGATGAATTCTTCTCTAAAAGATCCGAGGCTCTCTTGCAAGTTGTAAGATCAGGTGCCTCCTTAAAGAAGGATGCTCAGGCTTCTGACATTCCTGTTGTTTTGATCGAGAATAGTGGGAGATGCAACAAAAATGACAGTGATGAAAAGGTTCTTCCAAATGGGATTGCATGGATTCCTCATCTAGTCCAAACAATCACAGAAGTTGCATTGAACAAAAGTGAATCTATTTTTGTTGACAAGAATTTGATTGACGGACCGAATCCAAATCAGAGAGGAAAATTATGGATTCCTCTCATATTTGCTCTACAATACTTGTTCCTCGCGAAGCCAATAGAAGCACTAATCAGGAGAGACATTGCTACTGAAACAAAACCAGCATGGGAGACTCGCGATGTAGGTGATCGGAAGTGA 933 0.4191 MASQQQTVREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKDAQASDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLIDGPNPNQRGKLWIPLIFALQYLFLAKPIEALIRRDIATETKPAWETRDVGDRK* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1946 310 Pfam AIG1 family 40 229 IPR006703 GO:0005525
Psa3g1946 310 CDD Toc34_like 9 253 - -
Psa3g1946 310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 258 IPR027417 -
Psa3g1946 310 Gene3D - 1 269 IPR027417 -
Psa3g1946 310 PANTHER TRANSLOCASE OF CHLOROPLAST 34, CHLOROPLASTIC 5 307 - -
Psa3g1946 310 ProSiteProfiles AIG1-type G domain profile. 37 260 IPR006703 GO:0005525
Psa3g1946 310 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 5 307 IPR045058 -
Psa3g1946 310 TIGRFAM 3a0901s02IAP34: GTP-binding protein 1 309 IPR005688 GO:0006886|GO:0009707|GO:0015450
Psa3g1946 310 PIRSF Toc33/toc34 1 310 IPR005688 GO:0006886|GO:0009707|GO:0015450
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1946 Psa-Chr3 174479808 174483679 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1946 - - gmx:100782594 532.717