Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1922 GAAGCATTAGATGGTATTGAGTTTGCTAGAGGCTCTCCCACATCACAATGCGGTTCTCTTAGAGCTTCCATGCAACATCCAAAACCATTTGATTTAAGATATGTTGCAGTTGGAAATGAAGTTTGTGATAGATATAACTATCAAGGAAATTATCCCAAATTCTATGAAGCTATAAAACATAAATATCCAGATATTCAGATTATTTCGAATGGTTCTCAATATCCGCTTAATCATTCAGCAGATCTTTATGATTTTCATATTTATACAAATTCTAAGGATATGTTTTTCTATTATAACAAGTTTGATAAAGCACCACGATCAGGTCCTAAGGCATTTGTTAGTGAGTATGCTGTTTGGAGGGAAGATGCTGCCAATGGAAGCCTTTATGGAGCTGTGGCTGAAGCTGCATTTCTTATTGGACTTGAAAAAAATAGGTTTGAGTTATATAATTTATGA 456 0.3421 EALDGIEFARGSPTSQCGSLRASMQHPKPFDLRYVAVGNEVCDRYNYQGNYPKFYEAIKHKYPDIQIISNGSQYPLNHSADLYDFHIYTNSKDMFFYYNKFDKAPRSGPKAFVSEYAVWREDAANGSLYGAVAEAAFLIGLEKNRFELYNL* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1922 151 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 1 144 - -
Psa3g1922 151 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 1 144 - -
Psa3g1922 151 Gene3D Glycosidases 1 148 - -
Psa3g1922 151 SUPERFAMILY (Trans)glycosidases 1 146 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1922 Psa-Chr3 173222747 173223433 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1922 1 144 Glycoside Hydrolase AT3G10740 61.644 5.12e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1922 K01209 - gmx:100812703 223.016