Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1917 ATGAATCCATTATCAACCTTCAGATACAGAATCTTTCAATCAACCACAACTTCATTCTCACCCTTTTTTCTCTTCAACCAAAAACGATGGAAAAAACCCGTTATTTCAGCCCAAACCCGTTTGGAGGACCGAGTAAGAGACCCACATTTCGACAAATTAACAACCCATTTCAAAAAACTCAACATTGTCCTCAAAATCCACAGCCTCATGACAAATCGAAAACGCGGTTCTTTTGTTTCGCTTCAGCTTATGTCCCGCTGGAGAAACATCCTCGGACTCAATGTCACTGTCACTTCCTTTCTTCAAAAATACCCTCATGTTTTTGATTTGTTTCTTCACCCTTTTAGGAGGAACATGTGTTGCAGAATCACGAGGAAGATGAAGGAGTTGATGTTGCTGGAAGAGGTTGTTGCAAAAAGGTACGAGCTTGATATTGTGATGAGGGTGAAGAAGTTGCTTATGATGTCATTGAATGGTACTCTTCATGTGCATGCTTTGAGGTTGATCAGAAGAGAGTTGGGCCTTCCTTGTGATTTCAGAGACTCCATTCTTGGGAAATATAGTGATGAATTTAGGTTGGTTGATTTGGAGATTGTGGCATTGGTTGGTTGGGATGGTGAATTGGGAATGGCTCATGTTGAGAAATGGAGGGAGAGAGAGTATAGAGAAAAATGGTTGAGTGAGTTTGAGACTAAGTTTGCTTTTCCTATAAATTTTCCAACTGGGTTTAAGATTGAAAGAGGGTTTAGGGAAAAGTTGAAGACTTGGCAAAGGCTTTCTTATACAAAGCCTTATGAGAGAAAAGATGTAAAATGCGGCGGAGCACAACGCTATGAGAAGAGGGCTGTTGCTGTTCTTCATGAGCTGTTGAGCTTAACTGTGGAGAAAATGGTTGAGGTTGATCAATTGGCTCATTTTCGAAGGGATTTTGCAATCGAAGTTAATATGCGTGAGGTACTGCTTAGACATCCGGGGATATTTTACATATCAACAAAGGGAAACGCGCAAACTGTTTTTCTTAGGGAGGCTTATGAGAAAGGAGGGTTGGTTGAGCCTAATCCGGTGTATGCAGTTCGTAGGAACATGTTGGAGCTTGTGTTATTAGGGCGCAGGAAAACCAAACAATTATTAGCTTTTGATGAATTTAAAGAGAACAATACTGTTGTCTGTAAAGTAGATGAAGGTAAAAGAGAAGGAGATTGGGCGATTCAATTCTTGGAGGGTTATGAGAAGAATTGA 1239 0.4052 MNPLSTFRYRIFQSTTTSFSPFFLFNQKRWKKPVISAQTRLEDRVRDPHFDKLTTHFKKLNIVLKIHSLMTNRKRGSFVSLQLMSRWRNILGLNVTVTSFLQKYPHVFDLFLHPFRRNMCCRITRKMKELMLLEEVVAKRYELDIVMRVKKLLMMSLNGTLHVHALRLIRRELGLPCDFRDSILGKYSDEFRLVDLEIVALVGWDGELGMAHVEKWREREYREKWLSEFETKFAFPINFPTGFKIERGFREKLKTWQRLSYTKPYERKDVKCGGAQRYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFAIEVNMREVLLRHPGIFYISTKGNAQTVFLREAYEKGGLVEPNPVYAVRRNMLELVLLGRRKTKQLLAFDEFKENNTVVCKVDEGKREGDWAIQFLEGYEKN* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1917 412 Pfam Plant organelle RNA recognition domain 45 370 IPR021099 GO:0003723
Psa3g1917 412 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 13 410 - -
Psa3g1917 412 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 13 410 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1917 Psa-Chr3 173115082 173125479 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1917 - - vun:114194999 592.808