Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1898 ATGGAGATAGAGAAGGGAATTAAGGATGGTATGGAAATGGTGGAGAAAGAAGACAGCAAGAAGATGAACCACCGTCGACGTGGAGGAATCCGAACGCTACCTTTCATTTTTGCAAATGAAGCTTGTGATAGGTTCGCAAGTGCTGGATTTCATAGTAACTTAATAAGTTACTTAACGCAAGAACTGAACATGCCATTGGTAGAAGCTTCAAACACACTCACAAATTTTGGTGGAACATCTAGCTTCACTCCTCTCCTTGGTGCTCTCCTAGCAGATTCCTTCATTGGACGCTTTTGGACCATTACCATTGGATGCCTCATTTACGAACTCGGATTGATTAGCATCACTATATCGACTACACTACCCTATTTTCGTCCTCCACCATGTCCTACACAACTCAACTGCCAAGAACCTACATCTTTACAGTTATCACCACTTTATGTCTCTCTCCTTCTCACATCTCTTGGATCAGGTGGCATTAGGCCTTGTGTTGTTCCCTTTTCGGCGGATCAAGTCGACATGACAAAAGATGGTGTTGCATCTAGGAAGTGGAACCTCTTCAACTGGTACTTTATCATCATGGGTTTTGCTTCTCTGAGTGCTTTGACCATTGTGGTTTATATTCAAGATAACATGGGTTGGAGTTTGGGACTTGGCATTCCCACCATTGCTATGCTGATTTCGATTATTTTGTTTGTGTTGGGCTTGCCGTTTTATAAGAATGTGAAACCGGAAGGTAGTCCTTTAGTCCGTTTGGCGCAAGTGATCGCCGCTGCTGTCAAGAAAAGGAACGAGATATTGCCCGATGATCCTAAGCTTTTATATCGAAATAGGGAACTTGATGCTGCTATTTCTTTAGAAGGAGATCTTTTACACTCAAATCAATATAAATGGTTGGACAAGGCTGCAATTATCACAGATGTTGATGCCAAAGATTCAAATGCACCACCAAACCTTTGGAATTTAGCAACTGTTCATAGAGTTGAGGAGTTAAAATCCATTATTAGAATGCTTCCAATATGGGCTTCAGGGATTCTACTCATAACTTCCTCATCACATTTAGGTAGTTTCGTCATTCAACAAGCTCGTTCAATGGATCGCCACCTCGGTCCGTCATTCCAAATTGCACCAGCCAATATGTCAATTTTCAGTGTCTTAACAATGATGACAGGAGTTATTCTATACGAACGCCTTTTCGTCCCGTTTGCACGTAGGTTCACAAAGAATCCGGCTGGAATAACTTGTTTACAAAGAATGGGAGTAGGGTTTGTGATTAATATTATAGCCACTATAGTTTCAGCACTAGTGGAAATAAAAAGAAAAAATGTTGCTGCAGAATACAACTTATTGGATAATCCAAAAGCGATTATTCCGATAAGTGTGTTTTGGTTAGTACCTCAGTATTGTCTACATGGAGTGGCTGAAGTTTTCATGTCTGTTGGACATTTGGAGTTTCTGTTTGATCAATCACCGGAAAGTATGAGAAGTAGTGCTACTGCTTTGTACTGCATAACTACAGCCGTTGGTAATTATATGGGCACATTGTTGGTATCATTGGTTCATAAGTATACTGGTAAAGAGAGGAATTGGCTTCCTGATAGAAACCTTAATAGAGGAAGATTGGATTATTATTATTTTCTTATTAGTGGGATTCAAGTTATAAATCTCATTTATTACATAATATGTGCTTGGTTTTACACTTATAAGCCCTTGGGTGAAGTTTGTGAAAGAGACAAGGAAGAGTATTTGGAGCAAGAGAGTACAAATATATCAGTTGATAACTTAAAAGATGGTAAGGATGAGGATAAAAGAGGGTTTACAAAAGATGAATGA 1833 0.395 MEIEKGIKDGMEMVEKEDSKKMNHRRRGGIRTLPFIFANEACDRFASAGFHSNLISYLTQELNMPLVEASNTLTNFGGTSSFTPLLGALLADSFIGRFWTITIGCLIYELGLISITISTTLPYFRPPPCPTQLNCQEPTSLQLSPLYVSLLLTSLGSGGIRPCVVPFSADQVDMTKDGVASRKWNLFNWYFIIMGFASLSALTIVVYIQDNMGWSLGLGIPTIAMLISIILFVLGLPFYKNVKPEGSPLVRLAQVIAAAVKKRNEILPDDPKLLYRNRELDAAISLEGDLLHSNQYKWLDKAAIITDVDAKDSNAPPNLWNLATVHRVEELKSIIRMLPIWASGILLITSSSHLGSFVIQQARSMDRHLGPSFQIAPANMSIFSVLTMMTGVILYERLFVPFARRFTKNPAGITCLQRMGVGFVINIIATIVSALVEIKRKNVAAEYNLLDNPKAIIPISVFWLVPQYCLHGVAEVFMSVGHLEFLFDQSPESMRSSATALYCITTAVGNYMGTLLVSLVHKYTGKERNWLPDRNLNRGRLDYYYFLISGIQVINLIYYIICAWFYTYKPLGEVCERDKEEYLEQESTNISVDNLKDGKDEDKRGFTKDE* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1898 610 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 18 581 IPR000109 GO:0016020|GO:0022857|GO:0055085
Psa3g1898 610 Pfam POT family 98 530 IPR000109 GO:0016020|GO:0022857|GO:0055085
Psa3g1898 610 Gene3D MFS general substrate transporter like domains 6 571 IPR036259 -
Psa3g1898 610 PANTHER NITRATE TRANSPORTER 1 18 581 - -
Psa3g1898 610 SUPERFAMILY MFS general substrate transporter 18 569 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1898 Psa-Chr3 171865895 171869431 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa3g1898 38 597 Organic Solute Cotransporters AT1G68570 55.872 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1898 - - gmx:100812695 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1898 3 171865895 171869431 Psa3g1898 3 171865895 171869431 ECH