Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa3g1892 ATGGATTCATCCTGTTTCTCCAACGATGCAGTTTCTGGGTTCAAAGATAAGGAGTCAATGGTTGACCCGTTTTTGGTCGAAGCTCTTCAGAACCCTCGTCATCGCCTTACCATTCTGCGGATGGAGCTGGATATCCAGAAATTTCTGAATAATGCCGATCAACAGCATTTTGAGTTTCAACATTTCCCTTCTTCCTATCTCAGATTGGCTGCACATCGTGTTGCTCAACACTACAGTATGCAAACAATGGTTCAAGATAATGGCTTAGATGGCCAGAGTAAAATTCTGGTCAGAAAGTTACCTGAAAGCAAATATCCAGTGGTGCGTTTATCTGAAATACCTGTGAAACAGTTGGACAATGAGAAATCTGAGCAGAAAAAAATCGTCATTCGACCCAGGCCTCATAATTCATGTTTAAATGGAGCCAATGATTCTGCTAGAAAAGGAAACCCTCTAAGAAGTGTGGAAGAGAGGAAGGAGGAATATGATCGGGCAAGAGCACGCATCTTTAATGGCTCTACAAGCTTTGATTCAGGTGATACCCCAACTTTGGTCCCAATAGATGGGAGAAGTTCTTTAATGAGCAAGGATGAAAGTGAAACTAGCAAAATCCCCATGACTGATTCTGATAGATGCTTTAGTGTGAGGGATAATGGTTATCCTCGAGTTGCCATTATCAGAGATAGGGAAAAGGATAGAAGTGATCCAGATTATGATCGTAGCTATGGAAGGTGA 735 0.419 MDSSCFSNDAVSGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLNNADQQHFEFQHFPSSYLRLAAHRVAQHYSMQTMVQDNGLDGQSKILVRKLPESKYPVVRLSEIPVKQLDNEKSEQKKIVIRPRPHNSCLNGANDSARKGNPLRSVEERKEEYDRARARIFNGSTSFDSGDTPTLVPIDGRSSLMSKDESETSKIPMTDSDRCFSVRDNGYPRVAIIRDREKDRSDPDYDRSYGR* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa3g1892 244 ProSiteProfiles SUZ domain profile. 104 174 IPR024771 -
Psa3g1892 244 SUPERFAMILY R3H domain 9 123 IPR036867 GO:0003676
Psa3g1892 244 PANTHER OS05G0411600 PROTEIN 7 244 - -
Psa3g1892 244 Pfam R3H domain 37 88 IPR001374 GO:0003676
Psa3g1892 244 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 7 244 - -
Psa3g1892 244 Gene3D - 12 134 IPR036867 GO:0003676
Psa3g1892 244 CDD R3H_encore_like 34 99 - -
Psa3g1892 244 MobiDBLite consensus disorder prediction 224 244 - -
Psa3g1892 244 SMART R3H_4 19 100 IPR001374 GO:0003676
Psa3g1892 244 ProSiteProfiles R3H domain profile. 35 99 IPR001374 GO:0003676
Psa3g1892 244 Pfam SUZ domain 124 173 IPR024771 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa3g1892 Psa-Chr3 171237509 171239833 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa3g1892 - - gmx:100796710 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa3g1892 3 171237509 171239833 Psa3g1892 3 171237509 171239833 ECH